Instruction

Single-stem             Multi-stem

Parameters instructions

      Strategy A is suitable for both single- and multi-stem pre-microRNA prediction

      Strategy B is suitable for single-stem pre-microRNA prediction

      Strategy fusion is constructed by fusion strategy A and B with boosting, and can be applied for single-stem pre-microRNA prediction
 Minimal free energy : the minimal free energy of the RNA secondary sructure
The number of paired nucleic acids : The number of paired nucleic acids in the stem region
The number of consecutive paired nucleic acids : The number of consecutive paired nucleic acids
in the stem region
Important Notice:
Users MUST upload the data exactly the same form as the examples. In uploaded fasta format file, NO ',' is allowed in the title line.
Citation:Bioinformatics. 2011 May 15;27(10):1436-7. doi: 10.1093/bioinformatics/btr148. Epub 2011 Mar 23.

 
RPG