Tag Content
SG ID
SG00000048 
UniProt Accession
Theoretical PI
8.52  
Molecular Weight
190057 Da  
Genbank Nucleotide ID
Genbank Protein ID
Gene Name
ego-1 
Gene Synonyms/Alias
 
Protein Name
 
Protein Synonyms/Alias
SubName: Protein EGO-1SubName: RNA-directed RNA polymerase related EGO-1 
Organism
Caenorhabditis elegans 
NCBI Taxonomy ID
6239 
Chromosome Location
chr:I;7650410-7656332;-1
View in Ensembl genome browser  
Function in Stage
Function in Cell Type
Description
Temporarily unavailable 
The information of related literatures
1. E. M. Maine, J. Hauth, T. Ratliff, V. E. Vought, X. She and W. G. Kelly (2005) EGO-1, a putative RNA-dependent RNA polymerase, is required for heterochromatin assembly on unpaired dna during C. elegans meiosis. Curr Biol 15(21): 1972-8. 

Abstract
During meiosis in C. elegans, unpaired chromosomes and chromosomal regions accumulate high levels of histone H3 lysine 9 dimethylation (H3K9me2), a modification associated with facultative heterochromatin assembly and the resulting transcriptional silencing. Meiotic silencing of unpaired DNA may be a widely conserved genome defense mechanism. The mechanisms of meiotic silencing remain unclear, although both transcriptional and posttranscriptional processes are implicated. Cellular RNA-dependent RNA polymerases (RdRPs) function in development and RNA-mediated silencing in many species and in heterochromatin assembly in S. pombe. There are four C. elegans RdRPs, including two with known germline functions. EGO-1 is required for fertility and robust germline RNAi. RRF-3 acts genetically to repress RNAi and is required for normal meiosis and spermatogenesis at elevated temperatures (S. L'Hernault, personal communication). Among C. elegans RdRPs, we find that only EGO-1 is required for H3K9me2 enrichment on unpaired chromosomal regions during meiosis. This H3K9me2 enrichment does not require Dicer or Drosha nuclease or any of several other proteins required for RNAi. ego-1 interacts genetically with him-17, another regulator of chromatin and meiosis, to promote germline development. We conclude that EGO-1 is an essential component of meiotic silencing in C. elegans. PMID: [16271877] 

2. A. Smardon, J. M. Spoerke, S. C. Stacey, M. E. Klein, N. Mackin and E. M. Maine (2000) EGO-1 is related to RNA-directed RNA polymerase and functions in germ-line development and RNA interference in C. elegans. Curr Biol 10(4): 169-78. 

Abstract
BACKGROUND PMID: [10704412] 

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Figures for illustrating the function of this protein/gene
Ref: E. M. Maine, J. Hauth, T. Ratliff, V. E. Vought, X. She and W. G. Kelly (2005) EGO-1, a putative RNA-dependent RNA polymerase, is required for heterochromatin assembly on unpaired dna during C. elegans meiosis. Curr Biol 15(21): 1972-8. PMID: [16271877]
Ref: E. M. Maine, J. Hauth, T. Ratliff, V. E. Vought, X. She and W. G. Kelly (2005) EGO-1, a putative RNA-dependent RNA polymerase, is required for heterochromatin assembly on unpaired dna during C. elegans meiosis. Curr Biol 15(21): 1972-8. PMID: [16271877]
Ref: E. M. Maine, J. Hauth, T. Ratliff, V. E. Vought, X. She and W. G. Kelly (2005) EGO-1, a putative RNA-dependent RNA polymerase, is required for heterochromatin assembly on unpaired dna during C. elegans meiosis. Curr Biol 15(21): 1972-8. PMID: [16271877]
Ref: A. Smardon, J. M. Spoerke, S. C. Stacey, M. E. Klein, N. Mackin and E. M. Maine (2000) EGO-1 is related to RNA-directed RNA polymerase and functions in germ-line development and RNA interference in C. elegans. Curr Biol 10(4): 169-78. PMID: [10704412]
Function
 
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Subcellular Location
 
Tissue Specificity
 
Gene Ontology
GO IDGO termEvidence
GO:0003968 F:RNA-directed RNA polymerase activity IEA:UniProtKB-KW.
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Interpro
IPR007855;    RNA-dep_RNA_pol_euk-typ.
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Pfam
PF05183;    RdRP;    1.
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SMART
PROSITE
PRINTS
Created Date
18-Oct-2012 
Record Type
Experiment identified 
Protein sequence Annotation
Nucleotide Sequence
Length: 5208 bp   Go to nucleotide: FASTA
Protein Sequence
Length: 1632 bp   Go to amino acid: FASTA
The verified Protein-Protein interaction information
UniProt
Gene Symbol Ref Databases
Other Protein-Protein interaction resources
String database  
View Microarray data
Temporarily unavailable 
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