Tag Content
SG ID
SG00000057 
UniProt Accession
Theoretical PI
5.79  
Molecular Weight
25727 Da  
Genbank Nucleotide ID
Genbank Protein ID
Gene Name
ife-2 
Gene Synonyms/Alias
ORFNames=R04A9.4 
Protein Name
Eukaryotic translation initiation factor 4E-2 
Protein Synonyms/Alias
eIF-4E-2eIF4E-2 eIF-4F 25 kDa subunit; mRNA cap-binding protein; 
Organism
Caenorhabditis elegans 
NCBI Taxonomy ID
6239 
Chromosome Location
chr:X;381382-382710;-1
View in Ensembl genome browser  
Function in Stage
Function in Cell Type
Description
Temporarily unavailable 
The information of related literatures
1. A. Song, S. Labella, N. L. Korneeva, B. D. Keiper, E. J. Aamodt, M. Zetka and R. E. Rhoads (2010) A C. elegans eIF4E-family member upregulates translation at elevated temperatures of mRNAs encoding MSH-5 and other meiotic crossover proteins. J Cell Sci 123(Pt 13): 2228-37. 

Abstract
Caenorhabditis elegans expresses five family members of the translation initiation factor eIF4E whose individual physiological roles are only partially understood. We report a specific role for IFE-2 in a conserved temperature-sensitive meiotic process. ife-2 deletion mutants have severe temperature-sensitive chromosome-segregation defects. Mutant germ cells contain the normal six bivalents at diakinesis at 20 degrees C but 12 univalents at 25 degrees C, indicating a defect in crossover formation. Analysis of chromosome pairing in ife-2 mutants at the permissive and restrictive temperatures reveals no defects. The presence of RAD-51-marked early recombination intermediates and 12 well condensed univalents indicate that IFE-2 is not essential for formation of meiotic double-strand breaks or their repair through homologous recombination but is required for crossover formation. However, RAD-51 foci in ife-2 mutants persist into inappropriately late stages of meiotic prophase at 25 degrees C, similar to mutants defective in MSH-4/HIM-14 and MSH-5, which stabilize a critical intermediate in crossover formation. In wild-type worms, mRNAs for msh-4/him-14 and msh-5 shift from free messenger ribonucleoproteins to polysomes at 25 degrees C but not in ife-2 mutants, suggesting that IFE-2 translationally upregulates synthesis of MSH-4/HIM-14 and MSH-5 at elevated temperatures to stabilize Holliday junctions. This is confirmed by an IFE-2-dependent increase in MSH-5 protein levels. PMID: [20530576] 

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Figures for illustrating the function of this protein/gene
Function
Recognizes and binds the 7-methylguanosine-containingmRNA cap during an early step in the initiation of proteinsynthesis and facilitates ribosome binding by inducing theunwinding of the mRNAs secondary structures. All 5 eIF4E proteinsbind monomethyl cap structures. Only ife-1, ife-2 and ife-5 bindtrimethyl cap structures which result from trans-splicing.Translation of trimethyl cap structure mRNAs may be regulated byintracellular redox state; disulfide bonds change the width anddepth of the cap-binding cavity determining selectivity to mRNAcaps. 
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Subcellular Location
 
Tissue Specificity
Enriched in somatic cells. 
Gene Ontology
GO IDGO termEvidence
GO:0005737 C:cytoplasm IEA:InterPro.
GO:0003743 F:translation initiation factor activity IEA:UniProtKB-KW.
GO:0008340 P:determination of adult lifespan IMP:WormBase.
GO:0045727 P:positive regulation of translation IMP:WormBase.
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Interpro
IPR023398;    TIF_eIF4e-like_dom.
IPR001040;    TIF_eIF_4E.
IPR019770;    TIF_eIF_4E_CS.
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Pfam
PF01652;    IF4E;    1.
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SMART
PROSITE
PS00813;    IF4E;    1.
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PRINTS
Created Date
18-Oct-2012 
Record Type
Experiment identified 
Protein sequence Annotation
CHAIN         1    228       Eukaryotic translation initiation factor
                             4E-2.
                             /FTId=PRO_0000193644.
DISULFID    130    134       By similarity.
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Nucleotide Sequence
Length: bp   Go to nucleotide: FASTA
Protein Sequence
Length: 228 bp   Go to amino acid: FASTA
The verified Protein-Protein interaction information
UniProt
Gene Symbol Ref Databases
Y18D10A.8IntAct 
Y18D10A.8BioGRID 
Other Protein-Protein interaction resources
String database  
View Microarray data
Temporarily unavailable 
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