Tag Content
SG ID
SG00000142 
UniProt Accession
Theoretical PI
5.34  
Molecular Weight
37898 Da  
Genbank Nucleotide ID
Genbank Protein ID
Gene Name
rux 
Gene Synonyms/Alias
ORFNames=CG4336 
Protein Name
Cell cycle negative regulator roughex 
Protein Synonyms/Alias
 
Organism
Drosophila melanogaster (Fruit fly) 
NCBI Taxonomy ID
7227 
Chromosome Location
chr:X;5929786-5931833;-1
View in Ensembl genome browser  
Function in Stage
Function in Cell Type
Description
Temporarily unavailable 
The information of related literatures
1. P. Gonczy, B. J. Thomas and S. DiNardo (1994) roughex is a dose-dependent regulator of the second meiotic division during Drosophila spermatogenesis. Cell 77(7): 1015-25. 

Abstract
During spermatogenesis, germ cells execute two meiotic divisions, then withdraw from the cell cycle and initiate postmeiotic differentiation. We show that the gene roughex (rux) is a dose-dependent regulator of meiosis II during Drosophila spermatogenesis. rux mutant germ cells execute the two meiotic divisions, but then undergo an additional M phase resembling an extra meiosis II. Conversely, germ cells with excess rux function fail to undergo meiosis II. rux does not appear to act directly at meiosis II. Rather, rux appears to act through cyclin A during premeiotic G2 to regulate meiosis II. We propose that cyclin A-cdc2 kinase at the G2 to M transition of meiosis I activates a target necessary for meiosis II, thereby coupling the two meiotic divisions. PMID: [8020092] 

2. A. Llopart and J. M. Comeron (2008) Recurrent events of positive selection in independent Drosophila lineages at the spermatogenesis gene roughex. Genetics 179(2): 1009-20. 

Abstract
Our understanding of the role of positive selection in the evolution of genes with male-biased expression can be hindered by two observations. First, male-biased genes tend to be overrepresented among lineage-specific genes. Second, novel genes are prone to experience bursts of adaptive evolution shortly after their formation. A thorough study of the forces acting on male-biased genes therefore would benefit from phylogenywide analyses that could distinguish evolutionary trends associated with gene formation and later events, while at the same time tackling the interesting question of whether adaptive evolution is indeed idiosyncratic. Here we investigate the roughex (rux) gene, a dose-dependent regulator of Drosophila spermatogenesis with a C-terminal domain responsible for nuclear localization that shows a distinct amino acid sequence in the melanogaster subgroup. We collected polymorphism and divergence data in eight populations of six Drosophila species, for a total of 99 rux sequences, to study rates and patterns of evolution at this male-biased gene. Our results from two phylogeny-based methods (PAML and HyPhy) as well as from population genetics analyses (McDonald-Kreitman-based tests) indicate that amino acid replacements have contributed disproportionately to divergence, consistent with adaptive evolution at the Rux protein. Analyses based on extant variation show also the signature of recent selective sweeps in several of the populations surveyed. Most important, we detect the significant and consistent signature of positive selection in several independent Drosophila lineages, which evidences recurrent and concurrent events of adaptive evolution after rux formation. PMID: [18505872] 

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Figures for illustrating the function of this protein/gene
Function
Negative regulator of both mitosis and meiosis. Requiredfor the establishment of the G1 phase in the developing eye. 
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Subcellular Location
 
Tissue Specificity
 
Gene Ontology
GO IDGO termEvidence
GO:0005634 C:nucleus IDA:FlyBase.
GO:0007455 P:eye-antennal disc morphogenesis NAS:FlyBase.
GO:0000278 P:mitotic cell cycle IMP:FlyBase.
GO:0007096 P:regulation of exit from mitosis TAS:FlyBase.
GO:0040020 P:regulation of meiosis TAS:FlyBase.
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Interpro
IPR009259;    Roughex.
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Pfam
PF06020;    Roughex;    1.
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SMART
PROSITE
PRINTS
Created Date
18-Oct-2012 
Record Type
Experiment identified 
Protein sequence Annotation
CHAIN         1    335       Cell cycle negative regulator roughex.
                             /FTId=PRO_0000097536.
CONFLICT    328    328       T -> M (in Ref. 1; AAA61580).
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Nucleotide Sequence
Length: 1297 bp   Go to nucleotide: FASTA
Protein Sequence
Length: 335 bp   Go to amino acid: FASTA
The verified Protein-Protein interaction information
UniProt
Gene Symbol Ref Databases
SBioGRID 
CycEBioGRID 
astBioGRID 
bcdIntAct 
bowlIntAct 
CG5363BioGRID 
CycB-RBBioGRID 
CycABioGRID 
CycBBioGRID 
CycEBioGRID 
cdc2BioGRID 
cenG1AIntAct 
crnIntAct 
danIntAct 
DfdIntAct 
ebiBioGRID 
e(r)IntAct 
GelIntAct 
Lip3IntAct 
stgBioGRID 
pUf68IntAct 
dimmIntAct 
GstE2IntAct 
CG17292IntAct 
CG5390IntAct 
CG4496IntAct 
CG7511IntAct 
CG7296IntAct 
CG14798IntAct 
CG15676IntAct 
CG13900IntAct 
CG9027IntAct 
skapIntAct 
CG18745IntAct 
CG13625IntAct 
CskIntAct 
CG5731IntAct 
Rca1BioGRID 
CG31646IntAct 
rev7IntAct 
CG14119IntAct 
CG15043IntAct 
Bap60BioGRID 
CG15861IntAct 
CG3085IntAct 
CG16892-RAIntAct 
CG2116IntAct 
klarIntAct 
Ras85DBioGRID 
SBioGRID 
bowlBioGRID 
CycEBioGRID 
pUf68BioGRID 
klarBioGRID 
klarBioGRID 
astBioGRID 
cenG1A-RCBioGRID 
bcdBioGRID 
bowlBioGRID 
CG5363BioGRID 
CycB-RBBioGRID 
CycABioGRID 
CycBBioGRID 
CycEBioGRID 
cdc2BioGRID 
cenG1ABioGRID 
crnBioGRID 
CSN3BioGRID 
danBioGRID 
DfdBioGRID 
dimmBioGRID 
ebiBioGRID 
e(r)BioGRID 
GelBioGRID 
Lip3BioGRID 
stgBioGRID 
pUf68BioGRID 
CG9027BioGRID 
dimmMINT 
CG9027BioGRID 
CG17292BioGRID 
CskBioGRID 
CG33275BioGRID 
CG33275BioGRID 
CG33275BioGRID 
klarBioGRID 
CG5390MINT 
CskBioGRID 
CG4496MINT 
CG7511MINT 
CG7296BioGRID 
CG14798BioGRID 
CG15676BioGRID 
CG13900BioGRID 
CG9027BioGRID 
skapBioGRID 
CG18745BioGRID 
_MINT 
CG13625BioGRID 
CskBioGRID 
skapBioGRID 
CG5390-RABioGRID 
CG5731BioGRID 
_MINT 
CG4496BioGRID 
Rca1BioGRID 
CG31646BioGRID 
rev7BioGRID 
CG14119BioGRID 
CG15043BioGRID 
Bap60MINT 
CG13900-RABioGRID 
klarBioGRID 
CG15861BioGRID 
CG3085BioGRID 
CG16892-RABioGRID 
CG2116BioGRID 
klarMINT 
Ras85DBioGRID 
SlhBioGRID 
SBioGRID 
tweBioGRID 
weeBioGRID 
SlhIntAct 
SBioGRID 
tweBioGRID 
weeBioGRID 
Other Protein-Protein interaction resources
String database  
View Microarray data
Temporarily unavailable 
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