Tag Content
SG ID
SG00000148 
UniProt Accession
Theoretical PI
9.13  
Molecular Weight
76249 Da  
Genbank Nucleotide ID
Genbank Protein ID
Gene Name
sbr 
Gene Synonyms/Alias
nxf1 
Protein Name
Nuclear RNA export factor 1 
Protein Synonyms/Alias
Protein small bristles;DmNXF1 Protein tip-associating; 
Organism
Drosophila melanogaster (Fruit fly) 
NCBI Taxonomy ID
7227 
Chromosome Location
chr:X;10726785-10741125;-1
View in Ensembl genome browser  
Function in Stage
Function in Cell Type
Description
Temporarily unavailable 
The information of related literatures
1. A. A. Atsapkina, E. V. Golubkova, V. V. Kasatkina, E. O. Avanesian, N. A. Ivankova and L. A. Mamon (2010) [Spermatogenesis in Drosophila melanogaster. Tsitologiia 52(7): 574-9. 

Abstract
Specificity of regulation of genes expression at the transcriptional and posttranscriptional levels is typical for spermatogenesis in Drosophila and mammals, including humans. It becomes apparent in the existence of testis specific NXF (nuclear export factor). We have shown that the Dm NXF1 (SBR) protein is present in considerable amounts at all stages of the spermatogenesis. Using the antibody for the C-terminal part of the Dm NXF1 protein we have shown the cytoplasmic localization of the Dm NXF1 protein at early stages of the spermatogenesis. This protein is localized in the nuclear envelope at the stage of rounded spermatid. During the period of elongation, the Dm NXF1 protein has a polar localization, and is located only along one side of the extended spermatid nucleus. At the stage of spermatid individualization, this protein in the form of large cytoplasmic granules moves to the tail of the spermatozoon. PMID: [20799623] 

Back to Top
Figures for illustrating the function of this protein/gene
Function
Mediates the export of the majority of mRNAs from thenucleus to the cytoplasm. 
Back to Top
Subcellular Location
Nucleus, nucleoplasm. Cytoplasm.Note=Localized in the nucleoplasm and at both the nucleoplasmicand cytoplasmic faces of the nuclear pore complex. Shuttlesbetween the nucleus and the cytoplasm. 
Tissue Specificity
Expressed ubiquitously. 
Gene Ontology
GO IDGO termEvidence
GO:0005737 C:cytoplasm IEA:UniProtKB-SubCell.
GO:0031965 C:nuclear membrane IDA:FlyBase.
GO:0005654 C:nucleoplasm IDA:FlyBase.
GO:0000166 F:nucleotide binding IEA:InterPro.
GO:0003723 F:RNA binding IEA:UniProtKB-KW.
GO:0006378 P:mRNA polyadenylation IMP:FlyBase.
GO:0016973 P:poly(A)+ mRNA export from nucleus IMP:FlyBase.
Back to Top
Interpro
IPR001611;    Leu-rich_rpt.
IPR002075;    NTF2.
IPR018222;    Nuclear_transport_factor_2_euk.
IPR012677;    Nucleotide-bd_a/b_plait.
IPR005637;    TAP_C_dom.
IPR015245;    Tap_RNA-bd.
IPR009060;    UBA-like.
Back to Top
Pfam
PF02136;    NTF2;    1.
PF09162;    Tap-RNA_bind;    1.
PF03943;    TAP_C;    1.
Back to Top
SMART
SM00804;    TAP_C;    1.
Back to Top
PROSITE
PS51450;    LRR;    2.
PS50177;    NTF2_DOMAIN;    1.
PS50102;    RRM;    FALSE_NEG.
PS51281;    TAP_C;    1.
Back to Top
PRINTS
Created Date
18-Oct-2012 
Record Type
Experiment identified 
Protein sequence Annotation
CHAIN         1    672       Nuclear RNA export factor 1.
                             /FTId=PRO_0000220538.
DOMAIN      113    193       RRM.
REPEAT      255    280       LRR 1.
REPEAT      281    304       LRR 2.
REPEAT      305    332       LRR 3.
REPEAT      333    360       LRR 4.
DOMAIN      375    529       NTF2.
DOMAIN      618    672       TAP-C.
MOD_RES     561    561       Phosphoserine.
CONFLICT    292    292       I -> V (in Ref. 2; CAB75848).
CONFLICT    640    640       K -> KR (in Ref. 2; CAB75849).
Back to Top
Nucleotide Sequence
Length: 3264 bp   Go to nucleotide: FASTA
Protein Sequence
Length: 672 bp   Go to amino acid: FASTA
The verified Protein-Protein interaction information
UniProt
Gene Symbol Ref Databases
CG4802IntAct 
Nxt1IntAct 
CG14367IntAct 
NXT1IntAct 
CG14367BioGRID 
Other Protein-Protein interaction resources
String database  
View Microarray data
Temporarily unavailable 
Comments