Tag Content
SG ID
SG00000429 
UniProt Accession
Theoretical PI
8.26  
Molecular Weight
37214 Da  
Genbank Nucleotide ID
Genbank Protein ID
Gene Name
FKBP6 
Gene Synonyms/Alias
FKBP36 
Protein Name
Peptidyl-prolyl cis-trans isomerase FKBP6 
Protein Synonyms/Alias
PPIase FKBP6EC=5.2.1.8 36 kDa FK506-binding protein;36 kDa FKBPFKBP-36 FK506-binding protein 6;FKBP-6 Immunophilin FKBP36; Rotamase; 
Organism
Homo sapiens (Human) 
NCBI Taxonomy ID
9606 
Chromosome Location
chr:7;72742167-72772634;1
View in Ensembl genome browser  
Function in Stage
Function in Cell Type
Description
FKBP6 gene may play a role in modifying the susceptibility to idiopathic spermatogenic impairment in human and propose that the allele A of c.216C>A seems to be a protective factor for the development of male infertility 
The information of related literatures
1. W. Zhang, S. Zhang, C. Xiao, Y. Yang and A. Zhoucun (2007) Mutation screening of the FKBP6 gene and its association study with spermatogenic impairment in idiopathic infertile men. Reproduction 133(2): 511-6. 

Abstract
Fkbp6 has been proved to be a new component of synaptonemal complexes and be involved in homologous chromosomes pairing and male infertility in mice. To explore the possible association between variations in the FKBP6 gene and impaired spermatogenesis in human, mutation screening of all the eight exons and the intron/exon boundaries of the gene was performed in 323 patients with azoospermia or severe oligozoospermia and 205 fertile controls by denatured HPLC and DNA sequencing. As a result, four novel and one known single nucleotide transitions were identified, including c.58-2A>G, c.111C>T, c.156G>T, c.594G>A, and c.216C>A (rs3750075). The frequencies of genotype CA, allele A of c.216C>A and haplotype 'GAG' consisting of c.156G>T, c.216C>A, and c.594G>A were significantly lower in infertile patients than those in controls. These findings suggest that the FKBP6 gene may play a role in modifying the susceptibility to idiopathic spermatogenic impairment in human and propose that the allele A of c.216C>A seems to be a protective factor for the development of male infertility. PMID: [17307919] 

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Figures for illustrating the function of this protein/gene
Function
PPIases accelerate the folding of proteins. 
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Subcellular Location
 
Tissue Specificity
Detected in all tissues examined, with higherexpression in testis, heart, skeletal muscle, liver, and kidney. 
Gene Ontology
GO IDGO termEvidence
GO:0016020 C:membrane IBA:RefGenome.
GO:0005528 F:FK506 binding IBA:RefGenome.
GO:0003755 F:peptidyl-prolyl cis-trans isomerase activity IBA:RefGenome.
GO:0000239 P:pachytene IEA:Compara.
GO:0006457 P:protein folding TAS:ProtInc.
GO:0007283 P:spermatogenesis IEA:Compara.
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Interpro
IPR023566;    PPIase_FKBP.
IPR001179;    PPIase_FKBP_dom.
IPR013026;    TPR-contain_dom.
IPR011990;    TPR-like_helical.
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Pfam
PF00254;    FKBP_C;    1.
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SMART
PROSITE
PS50059;    FKBP_PPIASE;    1.
PS50005;    TPR;    FALSE_NEG.
PS50293;    TPR_REGION;    1.
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PRINTS
Created Date
18-Oct-2012 
Record Type
Experiment identified 
Protein sequence Annotation
CHAIN         1    327       Peptidyl-prolyl cis-trans isomerase
                             FKBP6.
                             /FTId=PRO_0000075329.
DOMAIN       54    143       PPIase FKBP-type.
REPEAT      171    204       TPR 1.
REPEAT      219    252       TPR 2.
REPEAT      253    286       TPR 3.
VAR_SEQ       1     19       MGGSALNQGVLEGDDAPGQ -> MSASSWPQNGMPPS (in
                             isoform 2).
                             /FTId=VSP_042038.
HELIX        21     25
TURN         26     28
STRAND       30     44
STRAND       47     50
STRAND       56     64
STRAND       72     74
HELIX        93    100
STRAND      107    112
HELIX       114    116
TURN        117    121
TURN        124    126
STRAND      133    143
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Nucleotide Sequence
Length: 1545 bp   Go to nucleotide: FASTA
Protein Sequence
Length: 327 bp   Go to amino acid: FASTA
The verified Protein-Protein interaction information
UniProt
Gene Symbol Ref Databases
CCNKIntAct 
CCNKHPRD 
GAPDHHPRD 
HSP90AA1HPRD 
NME7HPRD 
_HPRD 
NME7IntAct 
Other Protein-Protein interaction resources
String database  
View Microarray data
Temporarily unavailable 
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