Tag Content
SG ID
SG00000450 
UniProt Accession
Theoretical PI
5.03  
Molecular Weight
52588 Da  
Genbank Nucleotide ID
Genbank Protein ID
Gene Name
TAF7L 
Gene Synonyms/Alias
TAF2Q 
Protein Name
Transcription initiation factor TFIID subunit 7-like 
Protein Synonyms/Alias
Cancer/testis antigen 40;CT40 RNA polymerase II TBP-associated factor subunit Q; TATA box-binding protein-associated factor 50 kDa; Transcription initiation factor TFIID 50 kDa subunit; 
Organism
Homo sapiens (Human) 
NCBI Taxonomy ID
9606 
Chromosome Location
chr:X;100523241-100548059;-1
View in Ensembl genome browser  
Function in Stage
Function in Cell Type
Description
The precise temporal and spatial expressions of specific transcription regulation factors (TRF) have long been considered essential for spermatogenesis. We report for the first time that most of the alterations are not associated with gonadal dysfunction, while the sequence variant in exon 13 may represent a risk factor for spermatogenic failure. 
The information of related literatures
1. K. Stouffs, A. Willems, W. Lissens, H. Tournaye, A. Van Steirteghem and I. Liebaers (2006) The role of the testis-specific gene hTAF7L in the aetiology of male infertility. Mol Hum Reprod 12(4): 263-7. 

Abstract
The X-linked TAF7L gene is homologous to the autosomal transcription factor TAF7. Together with its testis-specific expression pattern, this might point to an important function in spermatogenesis. In order to analyse the involvement of the hTAF7L gene in the aetiology of male infertility, a total of 25 patients with maturation arrest of spermatogenesis have been analysed for the presence of mutations in this gene. Four alterations of the nucleotide sequence, with concomitant changes in the amino acid sequence, have been observed in 12 patients. All sequence alterations were also found either in a control group consisting of men with proven fertility or in a control group with men with normal spermatogenesis. Therefore, these alterations are probably polymorphisms. PMID: [16597641] 

2. O. Akinloye, J. Gromoll, C. Callies, E. Nieschlag and M. Simoni (2007) Mutation analysis of the X-chromosome linked, testis-specific TAF7L gene in spermatogenic failure. Andrologia 39(5): 190-5. 

Abstract
The precise temporal and spatial expressions of specific transcription regulation factors (TRF) have long been considered essential for spermatogenesis. Recently, it has been speculated that mammals have evolved more specialised TRF genes. In the human, the TAF7L gene may be essential for maintenance of spermatogenesis. In this study, we investigated the possible role of the TAF7L gene located on the X chromosome in testicular function and spermatogenic failure. In a case-controlled retrospective study, we recruited 16 infertile males with consistent, nonobstructive azoospermia and with normal serum follicle-stimulating hormone (FSH) levels. Twenty age-matched men with normal spermatogenesis with the same ethnic background (Caucasian) were recruited as controls. Their genomic DNA was screened for sequence changes in the coding regions and part of the flanking introns of the TAF7L gene by direct sequencing. Amino acid sequence was compared with the NCBI standard sequence (BC043391). Semen analysis and hormone evaluation were performed. We observed six sequence variations in four patients, consisting of two point mutations, one each in exon 9 and 13 and one six-basepair deletion in exon 13 with concomitant changes in amino acid. One additional nucleotide exchange was observed in intron 8. Most of these changes were also found in eight controls with the exception of changes in exon 13. A meta-analysis including the present study and literature data suggests a possible association of the point mutation in exon 13 with infertility. There was no association or relationship with reproductive hormones. In conclusion, the sequence variants in the cDNA sequence observed are common polymorphisms. The changes in intron 8 appear novel. We report for the first time that most of the alterations are not associated with gonadal dysfunction, while the sequence variant in exon 13 may represent a risk factor for spermatogenic failure. PMID: [17714218] 

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Figures for illustrating the function of this protein/gene
Function
Probably functions as a spermatogensis-specificcomponent of the DNA-binding general transcription factor complexTFIID, a multimeric protein complex that plays a central role inmediating promoter responses to various activators and repressors.May play a role in spermatogenesis (By similarity). 
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Subcellular Location
Nucleus (By similarity). Cytoplasm (Bysimilarity). Note=Cytoplasmic in spermatogonia and earlyspermatocytes (preleptotene, leptotene, and zygotene);translocates into the nuclei of pachytene spermatocytes and roundspermatids (By similarity). 
Tissue Specificity
Testis-specific. 
Gene Ontology
GO IDGO termEvidence
GO:0005737 C:cytoplasm IEA:UniProtKB-SubCell.
GO:0005669 C:transcription factor TFIID complex IEA:InterPro.
GO:0030154 P:cell differentiation IEA:UniProtKB-KW.
GO:0007275 P:multicellular organismal development IEA:UniProtKB-KW.
GO:0006355 P:regulation of transcription, DNA-dependent IEA:UniProtKB-KW.
GO:0007283 P:spermatogenesis IEA:UniProtKB-KW.
GO:0006367 P:transcription initiation from RNA polymerase II promoter IEA:InterPro.
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Interpro
IPR011989;    ARM-like.
IPR006751;    TAFII55_prot_cons_reg.
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Pfam
PF04658;    TAFII55_N;    1.
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SMART
PROSITE
PRINTS
Created Date
18-Oct-2012 
Record Type
Experiment identified 
Protein sequence Annotation
CHAIN         1    462       Transcription initiation factor TFIID
                             subunit 7-like.
                             /FTId=PRO_0000307861.
COILED      342    462       Potential.
COMPBIAS    336    377       Glu-rich.
VAR_SEQ       1     86       Missing (in isoform 2 and isoform 3).
                             /FTId=VSP_028847.
VAR_SEQ     317    390       Missing (in isoform 3).
                             /FTId=VSP_028848.
VARIANT      34     34       L -> P (in dbSNP:rs5951328).
                             /FTId=VAR_036695.
VARIANT      61     61       E -> K.
                             /FTId=VAR_036696.
VARIANT     308    308       S -> G (in dbSNP:rs35899692).
                             /FTId=VAR_036697.
VARIANT     350    351       Missing.
                             /FTId=VAR_036698.
VARIANT     458    458       R -> H (in dbSNP:rs41310729).
                             /FTId=VAR_036699.
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Nucleotide Sequence
Length: 1576 bp   Go to nucleotide: FASTA
Protein Sequence
Length: 462 bp   Go to amino acid: FASTA
The verified Protein-Protein interaction information
UniProt
Gene Symbol Ref Databases
_BioGRID 
TBPBioGRID 
TAF13BioGRID 
TAF1BioGRID 
TBPBioGRID 
Other Protein-Protein interaction resources
String database  
View Microarray data
Temporarily unavailable 
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