Tag Content
SG ID
SG00000582 
UniProt Accession
Theoretical PI
9.68  
Molecular Weight
43499 Da  
Genbank Nucleotide ID
Genbank Protein ID
Gene Name
SPATA17 
Gene Synonyms/Alias
 
Protein Name
Spermatogenesis-associated protein 17 
Protein Synonyms/Alias
 
Organism
Homo sapiens (Human) 
NCBI Taxonomy ID
9606 
Chromosome Location
chr:1;217804666-218045038;1
View in Ensembl genome browser  
Function in Stage
Function in Cell Type
Description
Genetic mechanisms have been implicated as a cause of some cases of male infertility. Recently, 10 novel genes involved in human spermatogenesis were identified by microarray analysis of human testicular tissue. One of these is spermatogenesis-associated 17 (SPATA17).  
The information of related literatures
1. T. Miyamoto, A. Tsujimura, Y. Miyagawa, E. Koh, N. Sakugawa, H. Miyakawa, H. Sato, M. Namiki, A. Okuyama and K. Sengoku (2009) A single nucleotide polymorphism in SPATA17 may be a genetic risk factor for Japanese patients with meiotic arrest. Asian J Androl 11(5): 623-8. 

Abstract
Genetic mechanisms have been implicated as a cause of some cases of male infertility. Recently, 10 novel genes involved in human spermatogenesis were identified by microarray analysis of human testicular tissue. One of these is spermatogenesis-associated 17 (SPATA17). To investigate whether defects in the SPATA17 gene are associated with azoospermia due to meiotic arrest, a mutational analysis was conducted, in which the SPATA17 coding regions of 18 Japanese patients with this condition were sequenced. A statistical analysis was carried out that included 18 patients with meiotic arrest, 20 patients with Sertoli-cell-only syndrome (SCOS) and 96 healthy control men. No mutations were found in SPATA17. However, three coding single nucleotide polymorphisms (cSNPs PMID: [19483714] 

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Figures for illustrating the function of this protein/gene
Function
 
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Subcellular Location
Cytoplasm (By similarity). 
Tissue Specificity
 
Gene Ontology
GO IDGO termEvidence
GO:0005737 C:cytoplasm IEA:UniProtKB-SubCell.
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Interpro
IPR000048;    IQ_motif_EF-hand-BS.
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Pfam
PF00612;    IQ;    3.
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SMART
SM00015;    IQ;    3.
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PROSITE
PS50096;    IQ;    3.
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PRINTS
Created Date
18-Oct-2012 
Record Type
Experiment identified 
Protein sequence Annotation
CHAIN         1    361       Spermatogenesis-associated protein 17.
                             /FTId=PRO_0000265933.
DOMAIN       32     61       IQ 1.
DOMAIN       55     84       IQ 2.
DOMAIN       91    120       IQ 3.
MOD_RES     180    180       Phosphoserine.
VARIANT      16     16       N -> S (in dbSNP:rs34652544).
                             /FTId=VAR_051382.
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Nucleotide Sequence
Length: 1292 bp   Go to nucleotide: FASTA
Protein Sequence
Length: 361 bp   Go to amino acid: FASTA
The verified Protein-Protein interaction information
UniProt
Gene Symbol Ref Databases
Other Protein-Protein interaction resources
String database  
View Microarray data
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