Tag Content
SG ID
SG00001761 
UniProt Accession
Theoretical PI
9.8  
Molecular Weight
34951 Da  
Genbank Nucleotide ID
Genbank Protein ID
Gene Name
Tbp 
Gene Synonyms/Alias
TBPB 
Protein Name
TATA-box-binding protein B 
Protein Synonyms/Alias
Box A-binding protein B; TATA sequence-binding protein B; TATA-box factor B; 
Organism
Rattus norvegicus (Rat) 
NCBI Taxonomy ID
10116 
Chromosome Location
chr:1;54390756-54407562;1
View in Ensembl genome browser  
Function in Stage
Function in Cell Type
Description
Temporarily unavailable 
The information of related literatures
1. S. P. Persengiev, S. Robert and D. L. Kilpatrick (1996) Transcription of the TATA binding protein gene is highly up-regulated during spermatogenesis. Mol Endocrinol 10(6): 742-7. 

Abstract
TATA-binding protein (TBP) and its associated factors are required for transcriptional initiation by all three RNA polymerases, and evidence for regulation of their activities during early development has been recently reported. In the present study, we have investigated the regulation of TBP gene expression during male germ cell development. TBP mRNA was found to be increased more than 40-fold in rat and mouse testis and spermatogenic cells relative to somatic tissues. This up-regulation was stage-dependent, occurring specifically in meiotic and postmeiotic cells. Nuclear run-on analysis further demonstrated that transcription of the TBP gene was markedly elevated in the adult mouse testis relative to somatic tissue and prepuberal testis, indicating that transcriptional induction accounts, in large part, for the increased abundance of TBP mRNA in spermatogenic cells. In contrast to TBP mRNA, levels of TBP protein were elevated only 2.5-fold in mouse spermatogenic cells relative to somatic tissues. Polysome gradient analysis suggested that translational repression is an important determining factor in the unexpectedly low ratio of TBP protein-mRNA in male germ cells. These findings raise the possibility that transcriptional induction of TBP during spermatogenesis reflects a cell-specific homeostatic mechanism that maintains TBP protein concentrations at sufficiently high levels throughout male germ cell development. PMID: [8776734] 

Back to Top
Figures for illustrating the function of this protein/gene
Function
General factor that plays a role in the activation ofarchaeal genes transcribed by RNA polymerase. Binds specificallyto the TATA box promoter element which lies close to the positionof transcription initiation (By similarity). 
Back to Top
Subcellular Location
 
Tissue Specificity
 
Gene Ontology
GO IDGO termEvidence
GO:0005737 C:cytoplasm IEA:Compara.
GO:0001939 C:female pronucleus IEA:Compara.
GO:0001940 C:male pronucleus IEA:Compara.
GO:0005719 C:nuclear euchromatin IEA:Compara.
GO:0005672 C:transcription factor TFIIA complex IEA:Compara.
GO:0005669 C:transcription factor TFIID complex IDA:RGD.
GO:0003677 F:DNA binding IDA:RGD.
GO:0044212 F:transcription regulatory region DNA binding IEA:Compara.
GO:0045893 P:positive regulation of transcription, DNA-dependent IDA:RGD.
GO:0007283 P:spermatogenesis IEP:RGD.
GO:0006383 P:transcription from RNA polymerase III promoter IEA:Compara.
GO:0006367 P:transcription initiation from RNA polymerase II promoter IEA:InterPro.
Back to Top
Interpro
IPR012295;    Beta2_adaptin/TBP_C_dom.
IPR000814;    TBP.
Back to Top
Pfam
PF00352;    TBP;    2.
Back to Top
SMART
PROSITE
PS00351;    TFIID;    2.
Back to Top
PRINTS
PR00686;    TIFACTORIID.;   
Back to Top
Created Date
18-Oct-2012 
Record Type
Experiment identified 
Protein sequence Annotation
REPEAT      144    220       1 (By similarity).
REPEAT      234    311       2 (By similarity).
Back to Top
Nucleotide Sequence
Length: 1923 bp   Go to nucleotide: FASTA
Protein Sequence
Length: 318 bp   Go to amino acid: FASTA
The verified Protein-Protein interaction information
UniProt
Gene Symbol Ref Databases
Other Protein-Protein interaction resources
String database  
View Microarray data
Temporarily unavailable 
Comments