Tag Content
SG ID
SG00001794 
UniProt Accession
Theoretical PI
8.86  
Molecular Weight
40923 Da  
Genbank Nucleotide ID
Genbank Protein ID
Gene Name
Nr1i3 
Gene Synonyms/Alias
Car 
Protein Name
Nuclear receptor subfamily 1 group I member 3 
Protein Synonyms/Alias
Constitutive androstane receptor;CAR 
Organism
Rattus norvegicus (Rat) 
NCBI Taxonomy ID
10116 
Chromosome Location
chr:13;87103890-87108846;1
View in Ensembl genome browser  
Function in Stage
Function in Cell Type
Description
Temporarily unavailable 
The information of related literatures
1. C. Q. Wang, D. D. Mruk, W. M. Lee and C. Y. Cheng (2007) Coxsackie and adenovirus receptor (CAR) is a product of Sertoli and germ cells in rat testes which is localized at the Sertoli-Sertoli and Sertoli-germ cell interface. Exp Cell Res 313(7): 1373-92. 

Abstract
The coxsackie and adenovirus receptor (CAR), a putative cell-cell adhesion molecule, has attracted wide interest due to its importance in viral pathogenesis and in mediating adenoviral gene delivery. However, the distribution pattern and physiological function of CAR in the testis is still not clear. Here, we identified CAR in Sertoli cells and germ cells of rats. In vivo studies have shown that CAR resides at the blood-testis barrier as well as at the ectoplasmic specialization. The persistent expression of CAR in rat testes from neonatal period throughout adulthood implicates its role in spermatogenesis. Using primary Sertoli cell cultures, we observed a significant induction of CAR during the formation of Sertoli cell epithelium. Furthermore, CAR was seen to be concentrated at inter-Sertoli cell junctions, co-localizing with tight junction protein marker ZO-1 and adherens junction protein N-cadherin. CAR was also found to be associated with proteins of Src kinase family and its protein level declined after TNFalpha treatment in Sertoli cell cultures. Immunofluorescent staining of isolated germ cells has revealed the presence of CAR on spermatogonia, spermatocytes, round spermatids and elongate spermatids. Taken together, we propose that CAR functions as an adhesion molecule in maintaining the inter-Sertoli cell junctions at the basal compartment of the seminiferous epithelium. In addition, CAR may confer adhesion between Sertoli and germ cells at the Sertoli-germ cell interface. It is possible that the receptor utilized by viral pathogens to breakthrough the epithelial barrier was also employed by developing germ cells to migrate through the inter-Sertoli cell junctions. PMID: [17359973] 

Back to Top
Figures for illustrating the function of this protein/gene
Function
Binds and transactivates the retinoic acid responseelements that control expression of the retinoic acid receptorbeta 2 and alcohol dehydrogenase 3 genes. Transactivates both thephenobarbital responsive element module of the human CYP2B6 geneand the CYP3A4 xenobiotic response element (By similarity). 
Back to Top
Subcellular Location
Nucleus (By similarity). Cytoplasm (Bysimilarity). Cytoplasm, cytoskeleton (By similarity).Note=Recruited to the cytoplasm by DNAJC7 (By similarity). 
Tissue Specificity
 
Gene Ontology
GO IDGO termEvidence
GO:0005737 C:cytoplasm ISS:UniProtKB.
GO:0005856 C:cytoskeleton IEA:UniProtKB-SubCell.
GO:0005829 C:cytosol IEA:Compara.
GO:0005634 C:nucleus ISS:UniProtKB.
GO:0043565 F:sequence-specific DNA binding IEA:InterPro.
GO:0003707 F:steroid hormone receptor activity IEA:InterPro.
GO:0004887 F:thyroid hormone receptor activity IEA:InterPro.
GO:0008270 F:zinc ion binding IEA:InterPro.
GO:0045892 P:negative regulation of transcription, DNA-dependent IEA:Compara.
Back to Top
Interpro
IPR008946;    Nucl_hormone_rcpt_ligand-bd.
IPR000536;    Nucl_hrmn_rcpt_lig-bd_core.
IPR001723;    Str_hrmn_rcpt.
IPR001728;    ThyrH_rcpt.
IPR001628;    Znf_hrmn_rcpt.
IPR013088;    Znf_NHR/GATA.
Back to Top
Pfam
PF00104;    Hormone_recep;    1.
PF00105;    zf-C4;    1.
Back to Top
SMART
SM00430;    HOLI;    1.
SM00399;    ZnF_C4;    1.
Back to Top
PROSITE
PS00031;    NUCLEAR_REC_DBD_1;    1.
PS51030;    NUCLEAR_REC_DBD_2;    1.
Back to Top
PRINTS
PR00398;    STRDHORMONER.;   
PR00047;    STROIDFINGER.;   
PR00546;    THYROIDHORMR.;   
Back to Top
Created Date
18-Oct-2012 
Record Type
Experiment identified 
Protein sequence Annotation
CHAIN         1    358       Nuclear receptor subfamily 1 group I
                             member 3.
                             /FTId=PRO_0000053556.
DNA_BIND     18     93       Nuclear receptor.
ZN_FING      21     41       NR C4-type.
ZN_FING      57     81       NR C4-type.
MOD_RES      48     48       Phosphothreonine; by PKC (By similarity).
Back to Top
Nucleotide Sequence
Length: 1077 bp   Go to nucleotide: FASTA
Protein Sequence
Length: 358 bp   Go to amino acid: FASTA
The verified Protein-Protein interaction information
UniProt
Gene Symbol Ref Databases
Other Protein-Protein interaction resources
String database  
View Microarray data
Temporarily unavailable 
Comments