Tag Content
SG ID
SG00002053 
UniProt Accession
Theoretical PI
5.86  
Molecular Weight
52377 Da  
Genbank Nucleotide ID
Genbank Protein ID
Gene Name
Ppara 
Gene Synonyms/Alias
Nr1c1, Ppar 
Protein Name
Peroxisome proliferator-activated receptor alpha 
Protein Synonyms/Alias
PPAR-alpha Nuclear receptor subfamily 1 group C member 1; 
Organism
Rattus norvegicus (Rat) 
NCBI Taxonomy ID
10116 
Chromosome Location
chr:7;123729774-123807090;1
View in Ensembl genome browser  
Function in Stage
Function in Cell Type
Description
Temporarily unavailable 
The information of related literatures
1. K. Thomas, D. Y. Sung, X. Chen, W. Thompson, Y. E. Chen, J. McCarrey, W. Walker and M. Griswold (2011) Developmental patterns of PPAR and RXR gene expression during spermatogenesis. Front Biosci (Elite Ed) 3(): 1209-20. 

Abstract
Members of the family of nuclear receptors that include peroxisome proliferator-activated receptors (PPARs) and retinoid X receptors (RXRs) are important mediators of selective gene activation during development and cellular differentiation. In this study, developmentally-specific PPAR and RXR patterns of expression that occur in somatic and germ cell populations in the testis were determined using quantative real-time PCR (qRT-PCR) studies on RNAs that were isolated from StaPut purified mouse germ cells and primary rat Sertoli cells. These qRT-PCR studies indicate that transcripts encoding the PPAR-Alpha (alpha), -Beta (beta), and -Gamma (gamma) and RXR -Alpha (alpha), -Beta (beta), and -Gamma (gamma) are developmentally expressed in both differentiating germ and Sertoli cells. In further experiments aimed at deciphering the physiological role that PPAR-Gamma (gamma) plays in Sertoli cells, 15-day primary rat Sertoli cells were infected with recombinant adenoviral vectors containing PPAR-Gamma (gamma) cDNA and PPAR-Gamma (gamma) RNAi constructs. Affymetrix microarray analysis and qRT-PCR validation studies using total RNA isolated from these transfected cells indicated that PPAR-Gamma regulates the pattern of expression of key lipid metabolic genes in Sertoli cells. PMID: [21622127] 

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Figures for illustrating the function of this protein/gene
Function
Ligand-activated transcription factor. Key regulator oflipid metabolism. Activated by the endogenous ligand 1-palmitoyl-2-oleoyl-sn-glycerol-3-phosphocholine (16:0/18:1-GPC). Activatedby oleylethanolamide, a naturally occurring lipid that regulatessatiety (By similarity). Receptor for peroxisome proliferatorssuch as hypolipidemic drugs and fatty acids. Regulates theperoxisomal beta-oxidation pathway of fatty acids. Functions astranscription activator for the ACOX1 and P450 genes.Transactivation activity requires heterodimerization with RXRA andis antagonized by NR2C2 (By similarity). 
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Subcellular Location
Nucleus. 
Tissue Specificity
Expressed predominantly in liver and kidney. 
Gene Ontology
GO IDGO termEvidence
GO:0005634 C:nucleus IDA:RGD.
GO:0008144 F:drug binding ISS:UniProtKB.
GO:0004879 F:ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity IMP:RGD.
GO:0008289 F:lipid binding ISS:UniProtKB.
GO:0043565 F:sequence-specific DNA binding IEA:InterPro.
GO:0003707 F:steroid hormone receptor activity TAS:RGD.
GO:0008270 F:zinc ion binding IEA:InterPro.
GO:0035095 P:behavioral response to nicotine IDA:RGD.
GO:0070166 P:enamel mineralization IEA:Compara.
GO:0008544 P:epidermis development IEA:Compara.
GO:0006631 P:fatty acid metabolic process IMP:RGD.
GO:0007507 P:heart development IEP:RGD.
GO:0042157 P:lipoprotein metabolic process IMP:RGD.
GO:0032099 P:negative regulation of appetite ISS:UniProtKB.
GO:0045776 P:negative regulation of blood pressure IMP:RGD.
GO:0010887 P:negative regulation of cholesterol storage IEA:Compara.
GO:0032091 P:negative regulation of protein binding IMP:RGD.
GO:0010871 P:negative regulation of receptor biosynthetic process IEA:Compara.
GO:0010891 P:negative regulation of sequestering of triglyceride IEA:Compara.
GO:0000122 P:negative regulation of transcription from RNA polymerase II promoter IEA:Compara.
GO:2000678 P:negative regulation of transcription regulatory region DNA binding IMP:RGD.
GO:0043526 P:neuroprotection IMP:RGD.
GO:0046321 P:positive regulation of fatty acid oxidation IEA:Compara.
GO:0045893 P:positive regulation of transcription, DNA-dependent ISS:UniProtKB.
GO:0072366 P:regulation of cellular ketone metabolic process by positive regulation of transcription from RNA polymerase II promoter IEA:Compara.
GO:0019217 P:regulation of fatty acid metabolic process TAS:RGD.
GO:0072363 P:regulation of glycolysis by positive regulation of transcription from RNA polymerase II promoter IEA:Compara.
GO:0072369 P:regulation of lipid transport by positive regulation of transcription from RNA polymerase II promoter IEA:Compara.
GO:0001666 P:response to hypoxia IDA:HGNC.
GO:0032868 P:response to insulin stimulus IMP:RGD.
GO:0042060 P:wound healing IEA:Compara.
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Interpro
IPR003074;    1Cnucl_rcpt.
IPR003076;    1Cnucl_rcpt_A.
IPR008946;    Nucl_hormone_rcpt_ligand-bd.
IPR000536;    Nucl_hrmn_rcpt_lig-bd_core.
IPR001723;    Str_hrmn_rcpt.
IPR001628;    Znf_hrmn_rcpt.
IPR013088;    Znf_NHR/GATA.
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Pfam
PF00104;    Hormone_recep;    1.
PF00105;    zf-C4;    1.
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SMART
SM00430;    HOLI;    1.
SM00399;    ZnF_C4;    1.
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PROSITE
PS00031;    NUCLEAR_REC_DBD_1;    1.
PS51030;    NUCLEAR_REC_DBD_2;    1.
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PRINTS
PR01288;    PROXISOMEPAR.;   
PR01289;    PROXISOMPAAR.;   
PR00398;    STRDHORMONER.;   
PR00047;    STROIDFINGER.;   
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Created Date
18-Oct-2012 
Record Type
Experiment identified 
Protein sequence Annotation
CHAIN         1    468       Peroxisome proliferator-activated
                             receptor alpha.
                             /FTId=PRO_0000053484.
DNA_BIND     99    173       Nuclear receptor.
ZN_FING     102    122       NR C4-type.
ZN_FING     139    161       NR C4-type.
REGION      280    468       Ligand-binding (By similarity).
REGION      304    433       Required for heterodimerization with RXRA
                             (By similarity).
SITE        433    433       Essential for heterodimerization with
                             RXRA (By similarity).
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Nucleotide Sequence
Length: 2022 bp   Go to nucleotide: FASTA
Protein Sequence
Length: 468 bp   Go to amino acid: FASTA
The verified Protein-Protein interaction information
UniProt
Gene Symbol Ref Databases
DutBioGRID 
_BioGRID 
Calm1DIP 
DutBioGRID 
NRIP1BioGRID 
Other Protein-Protein interaction resources
String database  
View Microarray data
Temporarily unavailable 
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