Tag Content
SG ID
SG00002058 
UniProt Accession
Theoretical PI
11.78  
Molecular Weight
21726 Da  
Genbank Nucleotide ID
Genbank Protein ID
Gene Name
Hist1h1t 
Gene Synonyms/Alias
H1ft, H1t 
Protein Name
Histone H1t 
Protein Synonyms/Alias
 
Organism
Rattus norvegicus (Rat) 
NCBI Taxonomy ID
10116 
Chromosome Location
chr:17;48463316-48464060;1
View in Ensembl genome browser  
Function in Stage
Function in Cell Type
Description
Temporarily unavailable 
The information of related literatures
1. K. L. Rose, A. Li, I. Zalenskaya, Y. Zhang, E. Unni, K. C. Hodgson, Y. Yu, J. Shabanowitz, M. L. Meistrich, D. F. Hunt and J. Ausio (2008) C-terminal phosphorylation of murine testis-specific histone H1t in elongating spermatids. J Proteome Res 7(9): 4070-8. 

Abstract
Previous studies gave differing results as to whether the testis-specific histone H1t was phosphorylated during rodent spermatogenesis. We show here that histones extracted from germ cell populations enriched with spermatids at different stages of development in rat testes reveal an electrophoretic shift in the position of H1t to slower mobilities in elongating spermatids as compared to that from preceding stages. Alkaline phosphatase treatment and radioactive labeling with (32)P demonstrated that the electrophoretic shift is due to phosphorylation. Mass spectrometric analysis of histone H1t purified from sexually mature mice and rat testes confirmed the occurrence of singly, doubly, and triply phosphorylated species, with phosphorylation sites predominantly found at the C-terminal end of the molecule. Furthermore, using collision-activated dissociation (CAD) and electron transfer dissociation (ETD), we have been able to identify the major phosphorylation sites. These include a new, previously unidentified putative H1t-specific cdc2 phosphorylation site in linker histones. The presence of phosphorylation at the C-terminal end of H1t and the timing of its appearance suggest that this post-translational modification is involved in the reduction of H1t binding strength to DNA. It is proposed that this could participate in the opening of the chromatin fiber in preparation for histone displacement by transition proteins in the next phase of spermiogenesis. PMID: [18698803] 

2. B. Sarg, S. Chwatal, H. Talasz and H. H. Lindner (2009) Testis-specific linker histone H1t is multiply phosphorylated during spermatogenesis. Identification of phosphorylation sites. J Biol Chem 284(6): 3610-8. 

Abstract
During normal spermatogenesis, the testis-specific linker histone H1t appears at pachytene stage becomes phosphorylated in early spermatids and disappears in late spermatids. Using reversed-phase and hydrophilic interaction liquid chromatography, H1t from rat and mouse testes was isolated, subjected to enzymatic digestion, and analyzed by mass spectrometry. We observed different phosphorylated states of H1t (mono-, di-, and triphosphorylated) as well as the unphosphorylated protein. Tandem mass spectrometry and immobilized metal ion affinity chromatography experiments with MS/MS/MS and multistage activation were utilized to identify five phosphorylation sites on H1t from rats. Phosphorylation occurs on both serine and threonine residues, whereas only two of these sites were located on peptides containing the CDK consensus motif (S/T)PXZ. Rat H1t phosphorylation starts first by phosphorylation of the nonconsensus motif SPKS in the COOH-terminal domain, namely at Ser-140 and to a smaller degree at a further nonconsensus motif at Ser-186. This is followed by phosphorylation of Ser-177 and Thr-155, both located in CDK consensus motifs. A single phosphorylation site at Ser-8 in the NH2-terminal tail was also found. Mouse H1t lacks Ser-186 and is phosphorylated at up to four sites. In contrast to somatic linker histones, no strict order of increasing phosphorylation could be detected in H1t. Thus, it appears that not the order of up-phosphorylation but the number of the phosphate groups is necessary for regulated chromatin decondensation, thus facilitating the substitution of H1t by transition proteins and protamines. PMID: [19043117] 

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Figures for illustrating the function of this protein/gene
Function
Histones H1 are necessary for the condensation ofnucleosome chains into higher order structures. 
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Subcellular Location
Nucleus. Chromosome. 
Tissue Specificity
Testis. Expressed in pachytene spermatocytesduring meiotic prophase I. 
Gene Ontology
GO IDGO termEvidence
GO:0000794 C:condensed nuclear chromosome IEA:Compara.
GO:0000786 C:nucleosome IEA:InterPro.
GO:0003677 F:DNA binding IEA:UniProtKB-KW.
GO:0007339 P:binding of sperm to zona pellucida IEA:Compara.
GO:0030154 P:cell differentiation IEA:UniProtKB-KW.
GO:0007275 P:multicellular organismal development IEA:UniProtKB-KW.
GO:0006334 P:nucleosome assembly IEA:InterPro.
GO:0030317 P:sperm motility IEA:Compara.
GO:0007283 P:spermatogenesis IEP:RGD.
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Interpro
IPR005818;    Histone_H1/H5.
IPR005819;    Histone_H5.
IPR011991;    WHTH_trsnscrt_rep_DNA-bd.
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Pfam
PF00538;    Linker_histone;    1.
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SMART
SM00526;    H15;    1.
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PROSITE
PS51504;    H15;    1.
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PRINTS
PR00624;    HISTONEH5.;   
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Created Date
18-Oct-2012 
Record Type
Experiment identified 
Protein sequence Annotation
INIT_MET      1      1       Removed.
CHAIN         2    208       Histone H1t.
                             /FTId=PRO_0000195925.
DOMAIN       38    111       H15.
MOD_RES       2      2       N-acetylserine (By similarity).
MOD_RES     156    156       Phosphothreonine (By similarity).
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Nucleotide Sequence
Length: 1006 bp   Go to nucleotide: FASTA
Protein Sequence
Length: 208 bp   Go to amino acid: FASTA
The verified Protein-Protein interaction information
UniProt
Gene Symbol Ref Databases
Other Protein-Protein interaction resources
String database  
View Microarray data
Temporarily unavailable 
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