Tag Content
SG ID
SG00002138 
UniProt Accession
Theoretical PI
9.21  
Molecular Weight
169764 Da  
Genbank Nucleotide ID
Genbank Protein ID
 
Gene Name
top2a 
Gene Synonyms/Alias
 
Protein Name
DNA topoisomerase 2 
Protein Synonyms/Alias
EC=5.99.1.3 
Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) 
NCBI Taxonomy ID
8364 
Chromosome Location
chr:GL173670.1;184859-207690;1
View in Ensembl genome browser  
Function in Stage
Function in Cell Type
Description
Temporarily unavailable 
The information of related literatures
1. M. Morse-Gaudio and M. S. Risley (1994) Topoisomerase II expression and VM-26 induction of DNA breaks during spermatogenesis in Xenopus laevis. J Cell Sci 107 ( Pt 10)(): 2887-98. 

Abstract
The relative content of topoisomerase II (topo II) and the induction of topo-II-mediated DNA damage and cellular abnormalities have been characterized in developing spermatogenic cells of Xenopus laevis to gain an insight into the role of topo II during spermatogenesis. Decatenation assays identified topo II activity in nuclear extracts from spermatocytes and pre-elongate spermatids, but not in extracts from elongate spermatids or sperm. Extracts from early-mid spermatids contained 14% (per cell) of the decatenation activity found in spermatocyte extracts. Immunoblots of SDS extracts from whole cells and nuclei from both spermatocytes and pre-elongate spermatids, but not elongate spermatids or sperm, resolved a 180 kDa polypeptide that reacts with polyclonal antisera to Xenopus oocyte topo II, an antipeptide antibody (FHD29) to human topo II alpha and beta, and an antipeptide antibody to human topo II alpha, suggesting homology between Xenopus spermatogenic cell topo II and mammalian topo II alpha. Immunofluorescence microscopy of topo II in testis cryosections revealed the presence of topo II in nuclei of all spermatogenic stages, but not in sperm. The relative levels of topo II estimated from fluorescence intensity were highest in spermatogonia and spermatocytes, then early-mid spermatids, followed by elongate spermatids and somatic cells. Incubation of isolated spermatogenic cells with teniposide (VM-26), a topo II-targetted drug, resulted in a dose-dependent induction of DNA breaks in all spermatocytes and spermatid stages to nuclear elongation stages, as analyzed by alkaline single cell gel electrophoresis. Addition of 0.5-50 microM VM-26 to spermatogenic cell cultures for 27 hours resulted in stage-dependent abnormalities. Mid-late spermatid stages were relatively resistant to VM-26-induced damage. In contrast, meiotic division stages were arrested and spermatogonia B were killed by VM-26, and VM-26 induced abnormal chromosome condensation in pachytene spermatocytes. The results of these studies show that cellular levels of topo II are stage-dependent during spermatogenesis, that most spermatogenic stages are sensitive to topo II-mediated DNA damage, and that spermatogonia B, meiotic divisions and pachytene spermatocytes are particularly sensitive to induction of morphological abnormalities and cell death during acute exposure to topo II-targetted drugs. PMID: [7876355] 

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Figures for illustrating the function of this protein/gene
Function
Control of topological states of DNA by transientbreakage and subsequent rejoining of DNA strands. Topoisomerase IImakes double-strand breaks (By similarity). 
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Subcellular Location
 
Tissue Specificity
 
Gene Ontology
GO IDGO termEvidence
GO:0005694 C:chromosome IEA:InterPro.
GO:0005524 F:ATP binding IEA:UniProtKB-KW.
GO:0003918 F:DNA topoisomerase (ATP-hydrolyzing) activity IEA:EC.
GO:0006265 P:DNA topological change IEA:InterPro.
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Interpro
IPR024946;    Arg_repress_C-like.
IPR003594;    ATPase-like_ATP-bd.
IPR020568;    Ribosomal_S5_D2-typ_fold.
IPR014721;    Ribosomal_S5_D2-typ_fold_subgr.
IPR001241;    Topo_IIA.
IPR002205;    Topo_IIA_A/C.
IPR013758;    Topo_IIA_A/C_ab.
IPR013757;    Topo_IIA_A_a.
IPR013759;    Topo_IIA_B/N_ab.
IPR013506;    Topo_IIA_bsu_dom2.
IPR013760;    Topo_IIA_cen.
IPR018522;    TopoIIA_CS.
IPR006171;    Toprim_domain.
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Pfam
PF00204;    DNA_gyraseB;    1.
PF00521;    DNA_topoisoIV;    1.
PF02518;    HATPase_c;    1.
PF01751;    Toprim;    1.
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SMART
SM00387;    HATPase_c;    1.
SM00433;    TOP2c;    1.
SM00434;    TOP4c;    1.
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PROSITE
PS00177;    TOPOISOMERASE_II;    1.
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PRINTS
PR00418;    TPI2FAMILY.;   
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Created Date
18-Oct-2012 
Record Type
Experiment identified 
Protein sequence Annotation
Nucleotide Sequence
Length: bp   Go to nucleotide: FASTA
Protein Sequence
Length: 1499 bp   Go to amino acid: FASTA
The verified Protein-Protein interaction information
UniProt
Gene Symbol Ref Databases
Other Protein-Protein interaction resources
String database  
View Microarray data
Temporarily unavailable 
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