SpermatogenesisOnline 1.0

Tag Content
SG ID
SG00007593 
UniProt Accession
Theoretical PI
11.03  
Molecular Weight
23564 Da  
Genbank Nucleotide ID
Genbank Protein ID
Gene Name
Rpl14 
Gene Synonyms/Alias
 
Protein Name
60S ribosomal protein L14 
Protein Synonyms/Alias
 
Organism
Mus musculus (Mouse) 
NCBI Taxonomy ID
10090 
Chromosome Location
chr:9;120480632-120483770;1
View in Ensembl genome browser  
Function in Stage
Uncertain 
Function in Cell Type
Uncertain 
Probability (GAS) of Function in Spermatogenesis
0.161982955 
The probability was calculated by GAS algorithm, ranging from 0 to 1. The closer it is to 1, the more possibly it functions in spermatogenesis.
Description
Temporarily unavailable 
Abstract of related literatures
1. This study describes comprehensive polling of transcription start and termination sites and analysis of previously unidentified full-length complementary DNAs derived from the mouse genome. We identify the 5' and 3' boundaries of 181,047 transcripts with extensive variation in transcripts arising from alternative promoter usage, splicing, and polyadenylation. There are 16,247 new mouse protein-coding transcripts, including 5154 encoding previously unidentified proteins. Genomic mapping of the transcriptome reveals transcriptional forests, with overlapping transcription on both strands, separated by deserts in which few transcripts are observed. The data provide a comprehensive platform for the comparative analysis of mammalian transcriptional regulation in differentiation and development. PMID: [16141072] 

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Function
 
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Subcellular Location
 
Tissue Specificity
 
Gene Ontology
GO IDGO termEvidence
GO:0022625 C:cytosolic large ribosomal subunit IEA:Compara.
GO:0003735 F:structural constituent of ribosome IEA:InterPro.
GO:0042273 P:ribosomal large subunit biogenesis IEA:Compara.
GO:0006364 P:rRNA processing IEA:Compara.
GO:0006412 P:translation IEA:InterPro.
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Interpro
IPR002784;    Ribosomal_L14.
IPR014722;    Transl_SH3-like_sub.
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Pfam
PF01929;    Ribosomal_L14e;    1.
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SMART
PROSITE
PRINTS
Created Date
18-Oct-2012 
Record Type
GAS predicted 
Sequence Annotation
INIT_MET      1      1       Removed (By similarity).
CHAIN         2    217       60S ribosomal protein L14.
                             /FTId=PRO_0000132032.
REPEAT      173    177       1-1; approximate.
REPEAT      178    182       1-2.
REPEAT      183    187       1-3.
REPEAT      188    192       1-4.
REPEAT      195    197       2-1.
REPEAT      198    200       2-2.
REGION      173    192       4 X 5 AA tandem repeats of Q-K-A-[APS]-X.
REGION      195    200       2 X 3 AA tandem repeats of K-G-Q.
MOD_RES      71     71       N6-acetyllysine (By similarity).
MOD_RES      79     79       N6-acetyllysine (By similarity).
MOD_RES      85     85       N6-acetyllysine (By similarity).
MOD_RES     139    139       Phosphoserine (By similarity).
CONFLICT     26     26       A -> T (in Ref. 1; BAB25272).
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Nucleotide Sequence
Length: 712 bp   Go to nucleotide: FASTA
Protein Sequence
Length: 217 bp   Go to amino acid: FASTA
The verified Protein-Protein interaction information
UniProt
 Gene Symbol Ref Databases
YwhabIntAct 
Other Protein-Protein interaction resources
String database  
View Microarray data
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