Tag Content
SG ID
SG00010526 
UniProt Accession
Theoretical PI
9.38  
Molecular Weight
23437 Da  
Genbank Nucleotide ID
Genbank Protein ID
Gene Name
Arl6ip1 
Gene Synonyms/Alias
Arl6ip 
Protein Name
ADP-ribosylation factor-like protein 6-interacting protein 1 
Protein Synonyms/Alias
ARL-6-interacting protein 1Aip-1 Protein TBX2; 
Organism
Mus musculus (Mouse) 
NCBI Taxonomy ID
10090 
Chromosome Location
chr:7;125262405-125273139;-1
View in Ensembl genome browser  
Function in Stage
Uncertain 
Function in Cell Type
Uncertain 
Probability (GAS) of Function in Spermatogenesis
0.853389271 
The probability was calculated by GAS algorithm, ranging from 0 to 1. The closer it is to 1, the more possibly it functions in spermatogenesis.
Description
Temporarily unavailable 
Abstract of related literatures
1. We report here the isolation of a new member of the ADP-ribosylation factor (ARF)-like family (ARL-6) present in the J2E erythroleukemic cell line, but not its myeloid variants. Consistent with this lineage-restricted expression, ARL-6 mRNA increased with erythropoietin-induced maturation of J2E cells, and decreased with interleukin 6-induced differentiation of M1 monoblastoid cells. In tissues, ARL-6 mRNA was most abundant in brain and kidney. While ARL-6 protein was predominantly cytosolic, its membrane association increased following exposure to GTP-gammaS, like many members of the ARF/ARL family. Using the yeast two-hybrid system, six molecules which interact with ARL-6 were identified including SEC61beta, a subunit of the heterotrimeric protein conducting channel SEC61p. Co-immunoprecipitation of ARL-6 confirmed a stable association between ARL-6 and SEC61beta in COS cells. These results demonstrate that ARL-6, a novel member of the ADP-ribosylation factor-like family, interacts with the SEC61beta subunit. PMID: [10508919] 

2. Proliferation and differentiation of hematopoietic stem cells and progenitors are regulated by signals from the microenvironment, involving both secreted cytokines and adhesion molecules. The exact mechanisms by which cytokines act on hematopoietic development are still not well understood. To extend the molecular characterization of gene regulation during cytokine-induced hematopoiesis, we applied mRNA differential display to identify genes regulated when multipotent progenitor cells are allowed to differentiate into monocytes and neutrophils. Here we report the isolation and characterization of a gene that is downregulated during myeloid differentiation and encodes a 23-kDa protein with four putative transmembrane segments. The gene, which we named Arl6ip, is identical to a mouse gene recently identified by its physical interaction with ADP-ribosylation-like factor-6 (ARL6), belonging to the Ras superfamily. We add information on its full-length characterization as well as its regulation during hematopoiesis. It is expressed in all hematopoietic cell lineages, but the highest level of expression is found in early myeloid progenitor cells. Preliminary studies by immunofluorescence microscopy revealed that the ARL6IP protein is predominantly localized to intracytoplasmic membranes. This suggests an involvement of the Arl6ip gene in protein transport, membrane trafficking, or cell signaling during hematopoietic maturation. PMID: [10995579] 

3. The National Institutes of Health's Mammalian Gene Collection (MGC) project was designed to generate and sequence a publicly accessible cDNA resource containing a complete open reading frame (ORF) for every human and mouse gene. The project initially used a random strategy to select clones from a large number of cDNA libraries from diverse tissues. Candidate clones were chosen based on 5'-EST sequences, and then fully sequenced to high accuracy and analyzed by algorithms developed for this project. Currently, more than 11,000 human and 10,000 mouse genes are represented in MGC by at least one clone with a full ORF. The random selection approach is now reaching a saturation point, and a transition to protocols targeted at the missing transcripts is now required to complete the mouse and human collections. Comparison of the sequence of the MGC clones to reference genome sequences reveals that most cDNA clones are of very high sequence quality, although it is likely that some cDNAs may carry missense variants as a consequence of experimental artifact, such as PCR, cloning, or reverse transcriptase errors. Recently, a rat cDNA component was added to the project, and ongoing frog (Xenopus) and zebrafish (Danio) cDNA projects were expanded to take advantage of the high-throughput MGC pipeline. PMID: [15489334] 

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Function
May be involved in protein transport, membranetrafficking, or cell signaling during hematopoietic maturation. 
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Subcellular Location
Membrane; Multi-pass membrane protein (Bysimilarity). Note=Predominantly localized to intracytoplasmicmembranes (By similarity). 
Tissue Specificity
Expressed in all hematopoietic cell lineages,with highest levels in early myeloid progenitor cells. 
Gene Ontology
GO IDGO termEvidence
GO:0005829 C:cytosol IDA:MGI.
GO:0016021 C:integral to membrane IDA:MGI.
GO:0005784 C:Sec61 translocon complex IPI:MGI.
GO:0006613 P:cotranslational protein targeting to membrane IPI:MGI.
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Interpro
IPR003388;    Reticulon.
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Pfam
PF02453;    Reticulon;    1.
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SMART
PROSITE
PRINTS
Created Date
18-Oct-2012 
Record Type
GAS predicted 
Sequence Annotation
CHAIN         1    203       ADP-ribosylation factor-like protein 6-
                             interacting protein 1.
                             /FTId=PRO_0000064656.
TRANSMEM     42     62       Helical; (Potential).
TRANSMEM     66     86       Helical; (Potential).
TRANSMEM    134    154       Helical; (Potential).
TRANSMEM    155    175       Helical; (Potential).
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Nucleotide Sequence
Length: 516 bp   Go to nucleotide: FASTA
Protein Sequence
Length: 203 bp   Go to amino acid: FASTA
The verified Protein-Protein interaction information
UniProt
Gene Symbol Ref Databases
Other Protein-Protein interaction resources
String database  
View Microarray data
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