Tag Content
SG ID
SG00011428 
UniProt Accession
Theoretical PI
9.85  
Molecular Weight
25262 Da  
Genbank Nucleotide ID
Genbank Protein ID
Gene Name
rp9 
Gene Synonyms/Alias
Rp9h 
Protein Name
Retinitis pigmentosa 9 protein homolog 
Protein Synonyms/Alias
Pim-1-associated protein;PAP-1 
Organism
Mus musculus (Mouse) 
NCBI Taxonomy ID
10090 
Chromosome Location
chr:9;22215491-22272802;-1
View in Ensembl genome browser  
Function in Stage
Uncertain 
Function in Cell Type
Uncertain 
Probability (GAS) of Function in Spermatogenesis
0.729657116 
The probability was calculated by GAS algorithm, ranging from 0 to 1. The closer it is to 1, the more possibly it functions in spermatogenesis.
Description
Temporarily unavailable 
Abstract of related literatures
1. Protooncogene, pim-1, has been reported to be a predisposition for lymphomagenesis along with myc, and its protein product, Pim-1, has been shown to be a serine/threonine protein kinase, whose activity is involved in proliferation and differentiation of blood cells. The signal transduction pathways neither to nor from Pim-1, however, have been clarified. We have cloned a cDNA encoding a novel Pim-1 binding protein, PAP-1, comprising 213 amino acids with a basic amino-acid cluster near the C-terminus. PAP-1 was colocalized with Pim-1 in human HeLa cell nuclei. The in vitro binding assays using GST fusion proteins of the wild-type and various deletion mutants revealed that the whole molecule of Pim-1 is required for the binding activity to PAP-1 and that Pim-1 binds to the region from amino-acid numbers 1-147 of PAP-1, or to two segments in the region. The association of PAP-1 with Pim-1 was also shown in vivo in transfected cells. Furthermore, PAP-1 was phosphorylated in vitro by Pim-1, but not a kinase-negative Pim-1 mutant. The two serine residues of PAP-1 at amino acids 204 and 206 near the C-terminus were phosphorylated by Pim-1. PAP-1 is thus thought to be a target protein for Pim-1 kinase. PMID: [10931201] 

2. We have identified a novel nucleolar protein, PAP-1-associated protein-1 (PAPA-1), after screening the interacting proteins with Pim-1-associated protein-1 (PAP-1), a protein that is a phosphorylation target of Pim-1 kinase. PAPA-1 comprises 345 amino acids with a basic amino-acid cluster. PAPA-1 was found to be localized in the nucleolus in transfected HeLa cells, and the lysine/histidine cluster was essential for nucleolar localization of PAPA-1. PAPA-1 protein and mRNA expression decreased upon serum restimulation of starvation-synchronized cells, which displayed maximum level of PAPA-1 expression at G0 and early G1 phase of the cell cycle. Ectopic expression of PAPA-1 induced growth suppression of cells, and the effect was dependent on its nucleolar localization in established HeLa cell lines that inducibly express PAPA-1 or its deletion mutant under the control of a tetracycline-inducible promoter. Furthermore, when PAPA-1-inducible HeLa cells were synchronized by thymidine, colcemid or mimosine, and then PAPA-1 was expressed, the proportion of cells at the G1 phase was obviously increased. These results suggest that PAPA-1 induces growth and cell cycle arrests at the G1 phase of the cell cycle. PMID: [15556297] 

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Function
Is thought to be a target protein for the PIM1 kinase.May play some roles in B-cell proliferation in association withPIM1. 
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Subcellular Location
Nucleus (Probable). 
Tissue Specificity
Highly expressed in the testis, moderately inthe kidney, liver and spleen, and weakly in the skeletal muscleand heart. 
Gene Ontology
GO IDGO termEvidence
GO:0005634 C:nucleus IEA:UniProtKB-SubCell.
GO:0003676 F:nucleic acid binding IEA:InterPro.
GO:0008270 F:zinc ion binding IEA:InterPro.
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Interpro
IPR001878;    Znf_CCHC.
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Pfam
SMART
SM00343;    ZnF_C2HC;    1.
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PROSITE
PS50158;    ZF_CCHC;    FALSE_NEG.
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PRINTS
Created Date
18-Oct-2012 
Record Type
GAS predicted 
Sequence Annotation
CHAIN         1    213       Retinitis pigmentosa 9 protein homolog.
                             /FTId=PRO_0000097429.
ZN_FING      96    114       CCHC-type.
REGION        1    147       PIM1-binding.
COMPBIAS    166    171       Poly-Ser.
COMPBIAS    176    205       Lys-rich.
MOD_RES     204    204       Phosphoserine; by PIM1; in vitro.
MOD_RES     206    206       Phosphoserine; by PIM1; in vitro.
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Nucleotide Sequence
Length: 1108 bp   Go to nucleotide: FASTA
Protein Sequence
Length: 213 bp   Go to amino acid: FASTA
The verified Protein-Protein interaction information
UniProt
Gene Symbol Ref Databases
Cir1IntAct 
Cir1IntAct 
Ino80bIntAct 
Other Protein-Protein interaction resources
String database  
View Microarray data
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