Tag Content
SG ID
SG00019414 
UniProt Accession
Theoretical PI
10.89  
Molecular Weight
12554 Da  
Genbank Nucleotide ID
Genbank Protein ID
Gene Name
Rpl35a 
Gene Synonyms/Alias
 
Protein Name
60S ribosomal protein L35a 
Protein Synonyms/Alias
 
Organism
Mus musculus (Mouse) 
NCBI Taxonomy ID
10090 
Chromosome Location
chr:16;33056539-33060275;1
View in Ensembl genome browser  
Function in Stage
Uncertain 
Function in Cell Type
Uncertain 
Probability (GAS) of Function in Spermatogenesis
0.035766629 
The probability was calculated by GAS algorithm, ranging from 0 to 1. The closer it is to 1, the more possibly it functions in spermatogenesis.
Description
Temporarily unavailable 
Abstract of related literatures
1. In a previous study we reported that ribosomal protein S5 gene is suppressed in differentiating and not in proliferating or apoptotic murine erythroleukaemia (MEL) cells (Vizirianakis et al., 1999). We wish to report here the isolation, characterisation and expression of the full length cDNA for another ribosomal protein, the L35a (rpL35a), in MEL cells. This cDNA shares significant structural homology in both DNA and protein levels to genes encoding the rat and human L35a ribosomal proteins. Northern blot hybridisation analysis has shown that the steady-state level of rpL35a mRNA is progressively reduced during differentiation of MEL cells along the erythrocytic maturation pathway induced by DMSO or UDP-4, two structurally unrelated inducers of differentiation. However, in cells where differentiation was inhibited by N(6)-methyladenosine, the level of rpL35a RNA transcripts was not affected. In addition, rpL35a gene expression was not altered in apoptotic MEL cells. Furthermore, the suppression of L35a gene was not correlated to any change in DNA methylation at CCGG sites located at the rpL35a gene locus in undifferentiated and differentiated MEL cells, as we observed for the rpS5 gene. Overall, these data suggest that the expression of ribosomal genes, the L35a of 60S ribosomal subunit and the S5 of 40S ribosomal subunit, are regulated by a common mechanism in differentiating MEL cells, leading to the observed decrease in ribosomal function. PMID: [11448102] 

2. This study describes comprehensive polling of transcription start and termination sites and analysis of previously unidentified full-length complementary DNAs derived from the mouse genome. We identify the 5' and 3' boundaries of 181,047 transcripts with extensive variation in transcripts arising from alternative promoter usage, splicing, and polyadenylation. There are 16,247 new mouse protein-coding transcripts, including 5154 encoding previously unidentified proteins. Genomic mapping of the transcriptome reveals transcriptional forests, with overlapping transcription on both strands, separated by deserts in which few transcripts are observed. The data provide a comprehensive platform for the comparative analysis of mammalian transcriptional regulation in differentiation and development. PMID: [16141072] 

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Function
Required for the proliferation and viability ofhematopoietic cells (By similarity). Plays a role in 60S ribosomalsubunit formation (By similarity). The protein was found to bindto both initiator and elongator tRNAs and consequently wasassigned to the P site or P and A site (By similarity). 
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Subcellular Location
 
Tissue Specificity
 
Gene Ontology
GO IDGO termEvidence
GO:0022625 C:cytosolic large ribosomal subunit IEA:Compara.
GO:0003735 F:structural constituent of ribosome IEA:InterPro.
GO:0042273 P:ribosomal large subunit biogenesis IEA:Compara.
GO:0006364 P:rRNA processing IEA:Compara.
GO:0006412 P:translation IEA:InterPro.
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Interpro
IPR001780;    Ribosomal_L35A.
IPR018266;    Ribosomal_L35Ae_CS.
IPR009000;    Transl_elong_init/rib_B-barrel.
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Pfam
PF01247;    Ribosomal_L35Ae;    1.
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SMART
PROSITE
PS01105;    RIBOSOMAL_L35AE;    1.
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PRINTS
Created Date
18-Oct-2012 
Record Type
GAS predicted 
Sequence Annotation
CHAIN         1    110       60S ribosomal protein L35a.
                             /FTId=PRO_0000192798.
MOD_RES       8      8       N6-acetyllysine (By similarity).
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Nucleotide Sequence
Length: 440 bp   Go to nucleotide: FASTA
Protein Sequence
Length: 110 bp   Go to amino acid: FASTA
The verified Protein-Protein interaction information
UniProt
Gene Symbol Ref Databases
Other Protein-Protein interaction resources
String database  
View Microarray data
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