SpermatogenesisOnline


Annotation of Genes/Proteins involved in Spermatogenesis



Prediction:

Greedy AUC Stepwise (GAS) is a novel algorithm, which maximize the AUC for given model. For a K-sparse problem, we assume the numbers of non-zero features should be less than K. Some authors proposed statistic learning to solve such problem such as LASSO, LARS, Compressive Sensing and so on. GAS is different from such regularity methods. When the model is given, such as SVM and logistic regression, GAS will find the best features using a special way of greedy searching.

The probability was calculated by GAS algorithm, ranging from 0 to 1. The closer it is to 1, the more possibly it functions in spermatogenesis. Without enough prior information to optimize the critical point, we suggest to use 0.5 as the cut-off. At that point, both the FPR and FNR are relative low according to our simulation study.

       
SG ID
 
 
Ensembl Gene ID Specie Gene Names
Chromosome
 
 
Start Site End Site Strand
Probability
 
 
SG00019111ENSMUSG00000058935Mus_musculusTex4846326812363283462-10.764949915
SG00008206ENSMUSG00000026790Mus_musculusOdf22297447412978726610.762636943
SG00017120ENSMUSG00000049387Mus_musculusCox7b257183406371939444-10.760642279
SG00015771ENSMUSG00000043535Mus_musculusSetx2289797012903799110.759535472
SG00022595ENSMUSG00000090505Mus_musculusGm3486144229752142302774-10.759344339
SG00022796ENSMUSG00000091792Mus_musculusGm3573144276419842769598-10.759344339
SG00022146ENSMUSG00000079269Mus_musculusGm3676144356277643568084-10.759344339
SG00021036ENSMUSG00000072605Mus_musculusGm10376144368872143694161-10.759344339
SG00022705ENSMUSG00000091296Mus_musculusGm4181145224994852255341-10.759344339
SG00003498ENSMUSG00000010538Mus_musculusTsacc38808404388100921-10.7592222
SG00014889ENSMUSG00000040699Mus_musculusLimd211106017570106022174-10.759064533
SG00008624ENSMUSG00000027518Mus_musculus1700021F07Rik217334808717335400210.758615513
SG00009076ENSMUSG00000028310Mus_musculusPpp3r244969161949694896-10.757432318
SG00010968ENSMUSG00000031452Mus_musculus1700029H14Rik81355073313562461-10.757187513
SG00011147ENSMUSG00000031754Mus_musculusNudt2189654330396560939-10.753563182
SG00015241ENSMUSG00000041791Mus_musculusCapza3613999004613999131010.753086301
SG00005308ENSMUSG00000021282Mus_musculusEif51211277631211279427010.752404579
SG00013269ENSMUSG00000037012Mus_musculusHk1106173160361842656-10.751342229
SG00005737ENSMUSG00000022033Mus_musculusPbk14664246746643665910.749018931
SG00019436ENSMUSG00000060726Mus_musculusTmsb15aX132253206132259800-10.74809499
SG00013960ENSMUSG00000038523Mus_musculus1700003F12Rik215437282115437573910.74801659
SG00010142ENSMUSG00000030007Mus_musculusCct76854014998541847110.747620736
SG00022828ENSMUSG00000091987Mus_musculusGm10352Y2390390239885610.747522673
SG00006827ENSMUSG00000024397Mus_musculusAif1173530793635313013-10.746365333
SG00014813ENSMUSG00000040548Mus_musculusTex211106363461106474737-10.743474588
SG00019927ENSMUSG00000063696Mus_musculusGm87308105388679105389777-10.742846326
SG00020276ENSMUSG00000067274Mus_musculusRplp0511600947611601373610.742846326
SG00016172ENSMUSG00000045211Mus_musculusNudt1814709776547098237810.742427686
SG00011238ENSMUSG00000031898Mus_musculusDpep38108497420108503319-10.741607371
SG00003293ENSMUSG00000007739Mus_musculusCct411228905192290378010.739515741
SG00009640ENSMUSG00000029147Mus_musculusPpm1g53150504131522918-10.738636392
SG00009258ENSMUSG00000028560Mus_musculusUsp14985905019860223410.736867711
SG00013332ENSMUSG00000037152Mus_musculusNdufc135120859951212910-10.736526664
SG00002446ENSMUSG00000001666Mus_musculusDdt107523397575236159-10.736016837
SG00022876ENSMUSG00000092360Mus_musculusGm20441107523419675243699-10.736016837
SG00013223ENSMUSG00000036928Mus_musculusStag3513872146813875362110.733898626
SG00004353ENSMUSG00000019710Mus_musculusMrpl243877234288772759410.733134894
SG00014094ENSMUSG00000038782Mus_musculus1700028J19Rik75148530351491492-10.732106556
SG00012018ENSMUSG00000033543Mus_musculusGtf2a29698603576987067310.730053003
SG00006662ENSMUSG00000024099Mus_musculusNdufv2176642813566450899-10.729861092
SG00011428ENSMUSG00000032239Mus_musculusRp992221549122272802-10.729657116
SG00007153ENSMUSG00000024973Mus_musculusHrasls5197687031771413210.728974043
SG00009761ENSMUSG00000029320Mus_musculus1700016H13Rik5104077058104085029-10.724540476
SG00003244ENSMUSG00000006941Mus_musculusEif1b912040172412040444510.724474592
SG00011057ENSMUSG00000031585Mus_musculusGtf2e28348423863488764510.72403508
SG00018196ENSMUSG00000054400Mus_musculusCklf810677480310678883610.723730759
SG00013061ENSMUSG00000036504Mus_musculusPhpt122542895025430744-10.723555709
SG00020698ENSMUSG00000070372Mus_musculusCapza13104625697104667423-10.723129732
SG00004880ENSMUSG00000020622Mus_musculusNt5c1b12103767791039697910.722619309
SG00002831ENSMUSG00000004070Mus_musculusHmox2164726361476674210.722461733
SG00022562ENSMUSG00000090369Mus_musculus4933411K16Rik19421267384212811710.72134534
SG00013905ENSMUSG00000038398Mus_musculusUpf3a8137856151379853810.721247379
SG00010363ENSMUSG00000030344Mus_musculusAkap3612680311612682432510.720389749
SG00009088ENSMUSG00000028333Mus_musculusAnp32b4464637744648552910.720036857
SG00008078ENSMUSG00000026592Mus_musculusTex351159029279159038811-10.719249241
SG00016033ENSMUSG00000044627Mus_musculusSwi523213433632143595-10.719172476
SG00009503ENSMUSG00000028932Mus_musculusPsmc25212911012130960510.718852293
SG00008519ENSMUSG00000027342Mus_musculusPcna2132074898132079050-10.71754428
SG00016047ENSMUSG00000044678Mus_musculusLy6k157462730474630416-10.716920657
SG00017006ENSMUSG00000048772Mus_musculusTmem53411692455611694118710.715700368
SG00002220ENSMUSG00000000411Mus_musculusTssk34129166258129168266-10.715228822
SG00019990ENSMUSG00000064063Mus_musculusBC04850713679642746796485610.71474316
SG00020957ENSMUSG00000071657Mus_musculusBscl2198911957892317310.713040607
SG00003167ENSMUSG00000006398Mus_musculusCdc204118105506118109957-10.712066853
SG00007866ENSMUSG00000026238Mus_musculusPtma1884233118842727310.711586789
SG00006463ENSMUSG00000023272Mus_musculusCreld215886500768865711110.711448542
SG00002807ENSMUSG00000003814Mus_musculusCalr88736574987370833-10.709967584
SG00020876ENSMUSG00000071265Mus_musculus1700086L19Rik12753897227539693210.709812538
SG00022168ENSMUSG00000079346Mus_musculus1700013D24Rik6124297611124307104-10.709437714
SG00016519ENSMUSG00000046755Mus_musculusKif2b119143662991438923-10.708733078
SG00017733ENSMUSG00000052075Mus_musculus1700029F12Rik139779181997804317-10.708422854
SG00017541ENSMUSG00000051113Mus_musculusFam71e17517519585175685610.708324975
SG00008680ENSMUSG00000027602Mus_musculusMap1lc3a215510203315510380910.707990849
SG00009070ENSMUSG00000028294Mus_musculusCfap20643463580834677455-10.706325693
SG00015639ENSMUSG00000042888Mus_musculusPrr3014101596908101599286-10.706128672
SG00011193ENSMUSG00000031831Mus_musculusDnaaf1812209913512212235410.705575422
SG00007703ENSMUSG00000026000Mus_musculusLancl116704709167085446-10.70422689
SG00008743ENSMUSG00000027702Mus_musculusLrrc3433052318930546791-10.703973829
SG00004684ENSMUSG00000020286Mus_musculus1700093K21Rik112341620323421155-10.703884866
SG00011736ENSMUSG00000032745Mus_musculusGpbp113112215888112280319-10.702160992
SG00007791ENSMUSG00000026125Mus_musculusPrss391345552753455990710.701877659
SG00019841ENSMUSG00000063171Mus_musculusRps4l614830317814830412010.701834954
SG00007118ENSMUSG00000024914Mus_musculusDrap11954228055424979-10.701602858
SG00006695ENSMUSG00000024169Mus_musculusIft14017251530362523644010.701267414
SG00009485ENSMUSG00000028901Mus_musculusGmeb14131776940131817517-10.701247159
SG00004595ENSMUSG00000020156Mus_musculusMum110796891797970664810.699118842
SG00019759ENSMUSG00000062727Mus_musculusHist1h2bk13221276902212816810.698927108
SG00020566ENSMUSG00000069300Mus_musculusHist1h2bj13221350832213554510.698927108
SG00019019ENSMUSG00000058385Mus_musculusHist1h2bg13236632652366388210.698927108
SG00020562ENSMUSG00000069268Mus_musculusHist1h2bf132366560523666065-10.698927108
SG00016646ENSMUSG00000047246Mus_musculusHist1h2be132367561123712993-10.698927108
SG00019662ENSMUSG00000062154Mus_musculusTex33157820883078226342-10.695023813
SG00020682ENSMUSG00000070331Mus_musculusQrich211116302643116316551-10.691581922
SG00020469ENSMUSG00000068600Mus_musculusGml215746495017465486610.690140333
SG00006416ENSMUSG00000023089Mus_musculusNdufa562446866624478013-10.689149752
SG00008527ENSMUSG00000027355Mus_musculusTmco5211670442711671823610.687698875
SG00008725ENSMUSG00000027673Mus_musculusNdufb53326359123265048810.685820733
SG00018815ENSMUSG00000057265Mus_musculusBbof112857500218577473010.684627498
SG00003006ENSMUSG00000005481Mus_musculusDdx398862390768625079110.683570015
SG00007212ENSMUSG00000025069Mus_musculusGsto219479400354796081410.683270643
 

   100/page  total records:15623.      Page number:      

 
Copyright (c) 2011-2015 Reproduction Data System. All rights reserved. Design by BioStaCs.