miRD (pre-microRNA Detection)


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For small RNA sequence Tag


Map file:  ( Sample )
Tag sequence:  ( Sample ) 

						
 Example:
 Map file
 t0000035(read id) chr1(chromosome) 4798998(start_site) 4799024(end site) +(strand)
 Tag sequence
 >t0000035(read id) 3234(read count)
 GAATGGATAAGGATTAGCGATGATACA(read sequence)

Parameters selection

 

      Species selection:
      Strategy selected:

(?)
Minimal free energy < :
The number of paired nucleic acids > : The number of paired nucleic acids
The number of consecutive paired nucleic acids > : The number of consecutive paired nucleic acids

 
RPG