Detail Information of SG001362


General information  

SG001362
Tarbp2
Prbp, TRBP
Mus musculus
10090
ENSMUSG00000023051
ENSMUSP00000117964  ENSMUSP00000097744  ENSMUSP00000120315  ENSMUSP00000023813  
ENSMUSP00000114953  ENSMUSP00000121748  ENSMUSP00000123213  ENSMUSP00000123339  

TARBP2, RISC loading complex RNA binding subunit [Mus musculus (house mouse)]

SpeciesUniprotGene stable IDGene Name
Rattus norvegicusQ3SWU0RGD:1307375Tarbp2
Danio rerioQ7SXR1ZFIN:ZDB-GENE-030131-8085tarbp2
Drosophila melanogasterQ9VLW8FlyBase:FBgn0031951r2d2
  More Orthology >>

Reviewed functional gene

Functional information  

postmeiotic    
Spermatid    

1. Abstract
Chromatin packaging in mammalian spermatozoa requires an ordered replacement of the somatic histones by two classes of spermatid-specific basic proteins, the transition proteins and the protamines. Temporal expression of transition proteins ... PMID: [10369260]  

J. Zhong, A. H. Peters, K. Lee and R. E. Braun (1999) A double-stranded RNA binding protein required for activation of repressed messages in mammalian germ cells. Nat Genet 22(2): 171-4. PMID: [10369260]

J. Zhong, A. H. Peters, K. Lee and R. E. Braun (1999) A double-stranded RNA binding protein required for activation of repressed messages in mammalian germ cells. Nat Genet 22(2): 171-4. PMID: [10369260]

J. Zhong, A. H. Peters, K. Lee and R. E. Braun (1999) A double-stranded RNA binding protein required for activation of repressed messages in mammalian germ cells. Nat Genet 22(2): 171-4. PMID: [10369260]

Prbp (encoded by the gene Tarbp2) may function as a chaperone in the assembly of specific translationally regulated ribonucleoprotein particles.
 
ReactomeID: R-MMU-426486
Small interfering RNA (siRNA) biogenesis
N/A

Expression and location  

Expressed highest in placenta
Expressed highest in spermatocyte
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View detail
Cytoplasm

Mutation in human orthology  

1000G (Phase 3): 144   ESP6500 (SI-V2): 72   ExAC (r0.3.1): 386   dbSNP(Build 147): 584

Chinese health control (254): 3  European health control (283): 1   Chinese patients (168):  

Gene NameDNMR-averageDNMR-SC
TARBP20.000015510.0000159743

Other information  

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Sub-OntologiesAccessionTermEvidence
Biological ProcessGO:0006417regulation of translationIEA
Biological ProcessGO:0007286spermatid developmentIMP
Biological ProcessGO:0007338single fertilizationIMP
Biological ProcessGO:0030422production of siRNA involved in RNA interferenceIEA
Biological ProcessGO:0030423targeting of mRNA for destruction involved in RNA interferenceIEA
Biological ProcessGO:0031047gene silencing by RNAIEA
Biological ProcessGO:0031054pre-miRNA processingIEA
Biological ProcessGO:0035087siRNA loading onto RISC involved in RNA interferenceIEA
Biological ProcessGO:0035196production of miRNAs involved in gene silencing by miRNAIEA
Biological ProcessGO:0035264multicellular organism growthIMP
Biological ProcessGO:0035280miRNA loading onto RISC involved in gene silencing by miRNAIEA
Biological ProcessGO:0045070positive regulation of viral genome replicationIEA
Biological ProcessGO:0045727positive regulation of translationIMP
Biological ProcessGO:0046782regulation of viral transcriptionIEA
Biological ProcessGO:0050689negative regulation of defense response to virus by hostIEA
Cellular ComponentGO:0005634nucleusIEA
Cellular ComponentGO:0005654nucleoplasmIEA
Cellular ComponentGO:0005737cytoplasmIEA
Cellular ComponentGO:0016442RISC complexIEA
Cellular ComponentGO:0016604nuclear bodyIEA
Cellular ComponentGO:0035068micro-ribonucleoprotein complexIDA
Cellular ComponentGO:0048471perinuclear region of cytoplasmIEA
Cellular ComponentGO:0070578RISC-loading complexIEA
Molecular FunctionGO:0003723RNA bindingIEA
Molecular FunctionGO:0003725double-stranded RNA bindingIEA
Molecular FunctionGO:0005515protein bindingIPI
Molecular FunctionGO:0019899enzyme bindingIEA
Molecular FunctionGO:0035197siRNA bindingIEA
Molecular FunctionGO:0042802identical protein bindingIEA
Molecular FunctionGO:0042803protein homodimerization activityIEA
Molecular FunctionGO:0047485protein N-terminus bindingIEA
Molecular FunctionGO:0070883pre-miRNA bindingIEA
Protein AGene name AProtein BGene name BEvidence
ENSMUSP00000023813Tarbp2ENSMUSP00000023829Cdkn1apredicted
ENSMUSP00000023813Tarbp2ENSMUSP00000024031Acy1experimental
ENSMUSP00000023813Tarbp2ENSMUSP00000024884Eif2ak2experimental
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P97473