Detail Information of SG001367


General information  

SG001367
Ubr2
9930021A08Rik, AI462103, AW540746, E130209G04Rik, mKIAA0349
Mus musculus
10090
ENSMUSG00000023977
ENSMUSP00000108963  ENSMUSP00000108961  

Ubiquitin protein ligase E3 component n-recognin 2 [Mus musculus (house mouse)]

SpeciesUniprotGene stable IDGene Name
Rattus norvegicusD4A9U6RGD:1593237Ubr2
Gallus gallusE1C1D2Ensembl:ENSGALG00000009906UBR2
Danio rerioF8W4R2ZFIN:ZDB-GENE-091110-2ubr1
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Reviewed functional gene

Functional information  

meiotic    
Spermatocyte    

1. Abstract
Substrates of the ubiquitin-dependent N-end rule pathway include proteins with destabilizing N-terminal residues. UBR1(-/-) mice, which lacked the pathway's ubiquitin ligase E3alpha, were viable and retained the N-end rule pathway. The present ... PMID: [14585983]  

2. Abstract
Ubiquitin E3 ligases target their substrates for ubiquitination, leading to proteasome-mediated degradation or altered biochemical properties. The ubiquitin ligase Ubr2, a recognition E3 component of the N-end rule proteolytic pathway, recognizes proteins ... PMID: [21103378]  

3. Abstract
Ubiquitination of histones provides an important mechanism regulating chromatin remodeling and gene expression. Recent studies have revealed ubiquitin ligases involved in histone ubiquitination, yet the responsible enzymes and the function of histone ... PMID: [20080676]  

4. Abstract
The N-end rule pathway of protein degradation targets proteins with destabilizing N-terminal residues. Ubr2 is one of the E3 ubiquitin ligases of the mouse N-end rule pathway. We have previously shown that ... PMID: [16488448]  

Y. T. Kwon, Z. Xia, J. Y. An, T. Tasaki, I. V. Davydov, J. W. Seo, J. Sheng, Y. Xie and A. Varshavsky (2003) Female lethality and apoptosis of spermatocytes in mice lacking the UBR2 ubiquitin ligase of the N-end rule pathway. Mol Cell Biol 23(22): 8255-71. PMID: [14585983]

Y. T. Kwon, Z. Xia, J. Y. An, T. Tasaki, I. V. Davydov, J. W. Seo, J. Sheng, Y. Xie and A. Varshavsky (2003) Female lethality and apoptosis of spermatocytes in mice lacking the UBR2 ubiquitin ligase of the N-end rule pathway. Mol Cell Biol 23(22): 8255-71. PMID: [14585983]

Y. T. Kwon, Z. Xia, J. Y. An, T. Tasaki, I. V. Davydov, J. W. Seo, J. Sheng, Y. Xie and A. Varshavsky (2003) Female lethality and apoptosis of spermatocytes in mice lacking the UBR2 ubiquitin ligase of the N-end rule pathway. Mol Cell Biol 23(22): 8255-71. PMID: [14585983]

Y. T. Kwon, Z. Xia, J. Y. An, T. Tasaki, I. V. Davydov, J. W. Seo, J. Sheng, Y. Xie and A. Varshavsky (2003) Female lethality and apoptosis of spermatocytes in mice lacking the UBR2 ubiquitin ligase of the N-end rule pathway. Mol Cell Biol 23(22): 8255-71. PMID: [14585983]

F. Yang, Y. Cheng, J. Y. An, Y. T. Kwon, S. Eckardt, N. A. Leu, K. J. McLaughlin and P. J. Wang (2010) The ubiquitin ligase Ubr2, a recognition E3 component of the N-end rule pathway, stabilizes Tex19.1 during spermatogenesis. PLoS One 5(11): e14017. PMID: [21103378]

F. Yang, Y. Cheng, J. Y. An, Y. T. Kwon, S. Eckardt, N. A. Leu, K. J. McLaughlin and P. J. Wang (2010) The ubiquitin ligase Ubr2, a recognition E3 component of the N-end rule pathway, stabilizes Tex19.1 during spermatogenesis. PLoS One 5(11): e14017. PMID: [21103378]

J. Y. An, E. A. Kim, Y. Jiang, A. Zakrzewska, D. E. Kim, M. J. Lee, I. Mook-Jung, Y. Zhang and Y. T. Kwon (2010) UBR2 mediates transcriptional silencing during spermatogenesis via histone ubiquitination. Proc Natl Acad Sci U S A 107(5): 1912-7. PMID: [20080676]

J. Y. An, E. A. Kim, Y. Jiang, A. Zakrzewska, D. E. Kim, M. J. Lee, I. Mook-Jung, Y. Zhang and Y. T. Kwon (2010) UBR2 mediates transcriptional silencing during spermatogenesis via histone ubiquitination. Proc Natl Acad Sci U S A 107(5): 1912-7. PMID: [20080676]

J. Y. An, E. A. Kim, Y. Jiang, A. Zakrzewska, D. E. Kim, M. J. Lee, I. Mook-Jung, Y. Zhang and Y. T. Kwon (2010) UBR2 mediates transcriptional silencing during spermatogenesis via histone ubiquitination. Proc Natl Acad Sci U S A 107(5): 1912-7. PMID: [20080676]

J. Y. An, E. A. Kim, Y. Jiang, A. Zakrzewska, D. E. Kim, M. J. Lee, I. Mook-Jung, Y. Zhang and Y. T. Kwon (2010) UBR2 mediates transcriptional silencing during spermatogenesis via histone ubiquitination. Proc Natl Acad Sci U S A 107(5): 1912-7. PMID: [20080676]

The ubiquitin ligase Ubr2, a recognition E3 component of the N-end rule proteolytic pathway, recognizes proteins with N-terminal destabilizing residues. The UBR2 ubiquitin ligase and, hence, the N-end rule pathway are required for male meiosis and spermatogenesis and for an essential aspect of female embryonic development. The ubiquitin ligase Ubr2 maintains genome integrity and invovles in homologous recombination repair.
 
ReactomeID: R-MMU-983168
Antigen processing: Ubiquitination & Proteasome degradation
N/A

Expression and location  

Expressed highest in thyroid gland
Expressed highest in spermatogonium
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View detail
Nucleus

Mutation in human orthology  

1000G (Phase 3): 3414   ESP6500 (SI-V2): 338   ExAC (r0.3.1): 1694   dbSNP(Build 147): 8360

Chinese health control (254): 21  European health control (283): 11   Chinese patients (168):  

Gene NameDNMR-averageDNMR-SC
UBR20.00006585250.00006707

Other information  

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Sub-OntologiesAccessionTermEvidence
Biological ProcessGO:0006342chromatin silencingIDA
Biological ProcessGO:0006511ubiquitin-dependent protein catabolic processIDA
Biological ProcessGO:0007141male meiosis IIMP
Biological ProcessGO:0007283spermatogenesisIMP
Biological ProcessGO:0016567protein ubiquitinationIEA
Biological ProcessGO:0030163protein catabolic processIEA
Biological ProcessGO:0032007negative regulation of TOR signalingISO
Biological ProcessGO:0033522histone H2A ubiquitinationIDA
Biological ProcessGO:0071233cellular response to leucineISO
Biological ProcessGO:0071596ubiquitin-dependent protein catabolic process via the N-end rule pathwayIBA
Cellular ComponentGO:0000151ubiquitin ligase complexIGI
Cellular ComponentGO:0000785chromatinIDA
Cellular ComponentGO:0005634nucleusIEA
Cellular ComponentGO:0005737cytoplasmIBA
Molecular FunctionGO:0004842ubiquitin-protein transferase activityISO
Molecular FunctionGO:0005515protein bindingIPI
Molecular FunctionGO:0008270zinc ion bindingIEA
Molecular FunctionGO:0016740transferase activityIEA
Molecular FunctionGO:0046872metal ion bindingIEA
Molecular FunctionGO:0061630ubiquitin protein ligase activityIDA
Molecular FunctionGO:0070728leucine bindingISO
Protein AGene name AProtein BGene name BEvidence
ENSMUSP00000108961Ubr2ENSMUSP00000109161Sac3d1experimental
ENSMUSP00000108961Ubr2ENSMUSP00000109237Copg1experimental
ENSMUSP00000108961Ubr2ENSMUSP00000109585experimental
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