Detail Information of SG001417


General information  

SG001417
Syce1
4933406J07Rik
Mus musculus
10090
ENSMUSG00000025480
ENSMUSP00000026553  ENSMUSP00000148137  

Synaptonemal complex central element protein 1 [Mus musculus (house mouse)]

SpeciesUniprotGene stable IDGene Name
Rattus norvegicusQ5XHZ2RGD:1559853Syce1
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Reviewed functional gene

Functional information  

meiotic    
Spermatocyte    

1. Abstract
In mammals, the synaptonemal complex is a structure required to complete crossover recombination. Although suggested by cytological work, in vivo links between the structural proteins of the synaptonemal complex and the ... PMID: [19247432]  

E. Bolcun-Filas, E. Hall, R. Speed, M. Taggart, C. Grey, B. de Massy, R. Benavente and H. J. Cooke (2009) Mutation of the mouse Syce1 gene disrupts synapsis and suggests a link between synaptonemal complex structural components and DNA repair. PLoS Genet 5(2): e1000393. PMID: [19247432]

E. Bolcun-Filas, E. Hall, R. Speed, M. Taggart, C. Grey, B. de Massy, R. Benavente and H. J. Cooke (2009) Mutation of the mouse Syce1 gene disrupts synapsis and suggests a link between synaptonemal complex structural components and DNA repair. PLoS Genet 5(2): e1000393. PMID: [19247432]

E. Bolcun-Filas, E. Hall, R. Speed, M. Taggart, C. Grey, B. de Massy, R. Benavente and H. J. Cooke (2009) Mutation of the mouse Syce1 gene disrupts synapsis and suggests a link between synaptonemal complex structural components and DNA repair. PLoS Genet 5(2): e1000393. PMID: [19247432]

E. Bolcun-Filas, E. Hall, R. Speed, M. Taggart, C. Grey, B. de Massy, R. Benavente and H. J. Cooke (2009) Mutation of the mouse Syce1 gene disrupts synapsis and suggests a link between synaptonemal complex structural components and DNA repair. PLoS Genet 5(2): e1000393. PMID: [19247432]

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Complex nameSubunits(UniProt IDs)Functional comment
Sycp1-Syce1-Syce2 complexQ9D495 Q505B8 Q62209 Completion of meiosis in mammals depends on the formation of the synaptonemal complex, a tripartite structure that physically links homologous chromosomes during prophase I. The function of the Sycp1-Syce1-Syce2 complex is not entirely clear, experiments suggest a role in synaptonemal-complex assembly, and perhaps also stability and recombination.
ReactomeID: R-MMU-1221633
Meiotic Synapsis
N/A

Expression and location  

Expressed highest in testis
Expressed highest in spermatocyte
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Nucleus

Mutation in human orthology  

1000G (Phase 3): 74   ESP6500 (SI-V2): 58   ExAC (r0.3.1): 247   dbSNP(Build 147): 313

Chinese health control (254): 9  European health control (283): 8   Chinese patients (168):  

Gene NameDNMR-averageDNMR-SC
SYCE10.000012820.0000115471

Other information  

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Sub-OntologiesAccessionTermEvidence
Biological ProcessGO:0007049cell cycleIEA
Biological ProcessGO:0007130synaptonemal complex assemblyIEA
Biological ProcessGO:0051301cell divisionIEA
Biological ProcessGO:0051321meiotic cell cycleIEA
Biological ProcessGO:0070193synaptonemal complex organizationIEA
Cellular ComponentGO:0000795synaptonemal complexIEA
Cellular ComponentGO:0000801central elementIDA
Cellular ComponentGO:0005634nucleusIEA
Cellular ComponentGO:0005654nucleoplasmTAS
Cellular ComponentGO:0005694chromosomeIEA
Molecular FunctionGO:0005515protein bindingIPI
Protein AGene name AProtein BGene name BEvidence
ENSMUSP00000026553Syce1ENSMUSP00000026573experimental
ENSMUSP00000026553Syce1ENSMUSP00000026886Itih5predicted
ENSMUSP00000026553Syce1ENSMUSP00000027057Terf1predicted
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Q9D495