Detail Information of SG001769


General information  

SG001769
Hmgb2
C80539, HMG-2, Hmg2
Mus musculus
10090
ENSMUSG00000054717
ENSMUSP00000065940  ENSMUSP00000147297  

High mobility group box 2 [Mus musculus (house mouse)]

SpeciesUniprotGene stable IDGene Name
Rattus norvegicusD3ZS25RGD:1561694RGD1561694
Rattus norvegicusD3ZN59RGD:1559962RGD1559962
Rattus norvegicusP52925RGD:69291Hmgb2
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Reviewed functional gene

Functional information  

postmeiotic    
Spermatid    

1. Abstract
High mobility group 2 protein (Hmgb2) is a member of the HMGB protein family, which includes the ubiquitous Hmgb1 and the embryo-specific Hmgb3. The three proteins are more than 80% identical at ... PMID: [11262228]  

L. Ronfani, M. Ferraguti, L. Croci, C. E. Ovitt, H. R. Scholer, G. G. Consalez and M. E. Bianchi (2001) Reduced fertility and spermatogenesis defects in mice lacking chromosomal protein Hmgb2. Development 128(8): 1265-73. PMID: [11262228]

L. Ronfani, M. Ferraguti, L. Croci, C. E. Ovitt, H. R. Scholer, G. G. Consalez and M. E. Bianchi (2001) Reduced fertility and spermatogenesis defects in mice lacking chromosomal protein Hmgb2. Development 128(8): 1265-73. PMID: [11262228]

L. Ronfani, M. Ferraguti, L. Croci, C. E. Ovitt, H. R. Scholer, G. G. Consalez and M. E. Bianchi (2001) Reduced fertility and spermatogenesis defects in mice lacking chromosomal protein Hmgb2. Development 128(8): 1265-73. PMID: [11262228]

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ReactomeID: R-MMU-211227
Activation of DNA fragmentation factor
N/A

Expression and location  

Expressed highest in bone marrow
Expressed highest in spermatocyte
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View detail
Nucleus

Mutation in human orthology  

1000G (Phase 3): 101   ESP6500 (SI-V2): 35   ExAC (r0.3.1): 207   dbSNP(Build 147): 351

Chinese health control (254): 4  European health control (283): 1   Chinese patients (168):  

Gene NameDNMR-averageDNMR-SC
HMGB20.00000818550.00000961904

Other information  

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Sub-OntologiesAccessionTermEvidence
Biological ProcessGO:0001938positive regulation of endothelial cell proliferationIEA
Biological ProcessGO:0002376immune system processIEA
Biological ProcessGO:0002437inflammatory response to antigenic stimulusIMP
Biological ProcessGO:0006265DNA topological changeISS
Biological ProcessGO:0006310DNA recombinationIEA
Biological ProcessGO:0006351transcription, DNA-templatedIEA
Biological ProcessGO:0006355regulation of transcription, DNA-templatedIEA
Biological ProcessGO:0006357regulation of transcription from RNA polymerase II promoterIEA
Biological ProcessGO:0006935chemotaxisIEA
Biological ProcessGO:0006954inflammatory responseIEA
Biological ProcessGO:0007283spermatogenesisIMP
Biological ProcessGO:0007289spermatid nucleus differentiationIMP
Biological ProcessGO:0008584male gonad developmentIMP
Biological ProcessGO:0010628positive regulation of gene expressionIDA
Biological ProcessGO:0010629negative regulation of gene expressionIDA
Biological ProcessGO:0032075positive regulation of nuclease activityIEA
Biological ProcessGO:0032496response to lipopolysaccharideIMP
Biological ProcessGO:0032728positive regulation of interferon-beta productionIMP
Biological ProcessGO:0043388positive regulation of DNA bindingIEA
Biological ProcessGO:0045087innate immune responseIEA
Biological ProcessGO:0045089positive regulation of innate immune responseIMP
Biological ProcessGO:0045648positive regulation of erythrocyte differentiationIEA
Biological ProcessGO:0045654positive regulation of megakaryocyte differentiationIEA
Biological ProcessGO:0045892negative regulation of transcription, DNA-templatedIEA
Biological ProcessGO:0045893positive regulation of transcription, DNA-templatedIEA
Biological ProcessGO:0045944positive regulation of transcription from RNA polymerase II promoterIEA
Biological ProcessGO:0048545response to steroid hormoneIMP
Biological ProcessGO:0050767regulation of neurogenesisIMP
Biological ProcessGO:0050829defense response to Gram-negative bacteriumIEA
Biological ProcessGO:0050830defense response to Gram-positive bacteriumIEA
Biological ProcessGO:0050918positive chemotaxisIEA
Biological ProcessGO:0060326cell chemotaxisIEA
Biological ProcessGO:0071222cellular response to lipopolysaccharideIEA
Biological ProcessGO:0072091regulation of stem cell proliferationIMP
Biological ProcessGO:1902042negative regulation of extrinsic apoptotic signaling pathway via death domain receptorsIMP
Cellular ComponentGO:0000790nuclear chromatinIDA
Cellular ComponentGO:0000793condensed chromosomeIEA
Cellular ComponentGO:0005576extracellular regionIEA
Cellular ComponentGO:0005615extracellular spaceIDA
Cellular ComponentGO:0005623cellIEA
Cellular ComponentGO:0005634nucleusIDA
Cellular ComponentGO:0005694chromosomeIEA
Cellular ComponentGO:0005730nucleolusIEA
Cellular ComponentGO:0005737cytoplasmIDA
Cellular ComponentGO:0043234protein complexIEA
Cellular ComponentGO:0048471perinuclear region of cytoplasmIEA
Molecular FunctionGO:0001158enhancer sequence-specific DNA bindingIDA
Molecular FunctionGO:0003677DNA bindingIEA
Molecular FunctionGO:0003684damaged DNA bindingIEA
Molecular FunctionGO:0003690double-stranded DNA bindingIDA
Molecular FunctionGO:0003700transcription factor activity, sequence-specific DNA bindingIEA
Molecular FunctionGO:0003723RNA bindingIEA
Molecular FunctionGO:0008134transcription factor bindingIDA
Molecular FunctionGO:0008301DNA binding, bendingIEA
Molecular FunctionGO:0019904protein domain specific bindingIPI
Molecular FunctionGO:0042056chemoattractant activityIEA
Molecular FunctionGO:0044212transcription regulatory region DNA bindingIEA
Molecular FunctionGO:0044378non-sequence-specific DNA binding, bendingISS
Molecular FunctionGO:0050786RAGE receptor bindingIEA
Molecular FunctionGO:0097100supercoiled DNA bindingISS
Protein AGene name AProtein BGene name BEvidence
ENSMUSP00000065940Hmgb2ENSMUSP00000066012Zfp266experimental
ENSMUSP00000065940Hmgb2ENSMUSP00000066238Rap1bexperimental
ENSMUSP00000065940Hmgb2ENSMUSP00000066256Ercc6experimental
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P30681