Detail Information of SG028901


General information  

SG028901
Psma6
IOTA
Mus musculus
10090
ENSMUSG00000021024
ENSMUSP00000123914  

proteasome (prosome, macropain) subunit, alpha type 6 [Mus musculus (house mouse)]

SpeciesUniprotGene stable IDGene Name
Rattus norvegicusQ5HZD9Ensembl:ENSRNOG00000049150LOC100125377
Rattus norvegicusP60901RGD:61849Psma6
Gallus gallusF1NEQ6Ensembl:ENSGALG00000010060PSMA6
  More Orthology >>

Candidated functional gene (Predicted, probability = 0.8106)

Functional information  

 
 

1. Abstract
The PA200 proteasome activator is a broadly expressed nuclear protein. Although how PA200 normally functions is not fully understood, it has been suggested to be involved in the repair of DNA double-strand ... PMID: [16581775]  

B. Khor, A. L. Bredemeyer, C. Y. Huang, I. R. Turnbull, R. Evans, L. B. Maggi, Jr., J. M. White, L. M. Walker, K. Carnes, R. A. Hess and B. P. Sleckman (2006) Proteasome activator PA200 is required for normal spermatogenesis. Mol Cell Biol 26(8): 2999-3007. PMID: [16581775]

B. Khor, A. L. Bredemeyer, C. Y. Huang, I. R. Turnbull, R. Evans, L. B. Maggi, Jr., J. M. White, L. M. Walker, K. Carnes, R. A. Hess and B. P. Sleckman (2006) Proteasome activator PA200 is required for normal spermatogenesis. Mol Cell Biol 26(8): 2999-3007. PMID: [16581775]

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Complex nameSubunits(UniProt IDs)Functional comment
20S proteasomeQ9R1P4 P49722 O70435
Q9R1P0 Q9Z2U1 Q9QUM9
Q9Z2U0 O09061 Q9R1P3
Q9R1P1 P99026 O55234
Q60692 P70195
The proteasome is an essential component of the ATP-dependent proteolytic pathway in eukaryotic cells and is responsible for the degradation of most cellular proteins (for reviews see PMID:8811196 and PMID:10872471). It contains a barrel-shaped proteolytic core complex (the 20S proteasome), and is capped at one or both ends by regulatory complexes like the 19S complex (PMID:11812135), modulator (PMID:8621709), PA28 (PMID:9325261) and PA28gamma (PMID:9325261). Interferon-gamma (IFN-gamma) alters the peptide-degrading specificity of proteasomes and produces an immunoproteasome responsible for accelerated processing of nonself endogenous antigens by inducing the replacement of subunits Psmb5, Psmb6 and Psmb7 by Psmb8, Psmb9 and Psmb10, respectively.
immunoproteasomeQ9R1P4 P49722 O70435
Q9R1P0 Q9Z2U1 Q9QUM9
Q9Z2U0 O09061 O35955
Q9R1P3 Q9R1P1 P99026
P28063 P28076
The proteasome is an essential component of the ATP-dependent proteolytic pathway in eukaryotic cells and is responsible for the degradation of most cellular proteins (for reviews see PMID:8811196 and PMID:10872471). It contains a barrel-shaped proteolytic core complex (the 20S proteasome), and is capped at one or both ends by regulatory complexes like the 19S complex (PMID:11812135), modulator (PMID:8621709), PA28 (PMID:9325261) and PA28gamma (PMID:9325261). Interferon-gamma (IFN-gamma) alters the peptide-degrading specificity of proteasomes and produces an immunoproteasome responsible for accelerated processing of nonself endogenous antigens by inducing the replacement of subunits Psmb5, Psmb6 and Psmb7 by Psmb8, Psmb9 and Psmb10, respectively.
ReactomeID: R-MMU-983168
Antigen processing: Ubiquitination & Proteasome degradation

Expression and location  

Expressed highest in testis
Expressed highest in spermatid
View detail
View detail
Cytoplasm

Mutation in human orthology  

1000G (Phase 3): 37   ESP6500 (SI-V2): 29   ExAC (r0.3.1): 127   dbSNP(Build 147): 173

Chinese health control (254): 5  European health control (283): 4   Chinese patients (168):  

Gene NameDNMR-averageDNMR-SC
PSMA60.000009235250.00000937829

Other information  

 
Protein AGene name AProtein BGene name BEvidence
ENSMUSP00000021412Psma6ENSMUSP00000021413Nfkbiapredicted
ENSMUSP00000021412Psma6ENSMUSP00000021447Ppp2r5epredicted
ENSMUSP00000021412Psma6ENSMUSP00000021458experimental
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Q9QUM9