1. Demo

(This module allows users to experience the entire analysis process using VCF files uploaded automatically in the background. Users do not need to upload new data and set parameters.)

Demo1

Demo2

2. Tutorial

Start with describing relationships between individuals

Next, define a inheritance model & genotype pattern

Then, check your job status

Last, achieve your final results

 

 

 

 

 

 

 

Reanalysis your pedigree

3. FAQ

Can I use different version of *.vcf files crated by different variants calling software?

Of course, PedMiner supports different vcf version files no matter what variants calling methods you choosed.

Can I use PedMiner to deal with the pedigree sequenced by WGS?

Users will fail to submit their samples bacause of network capacity constraint. That limits PedMiner to deal with WGS sequenced pedigree.

Why did I fail to submit the *.vcf files?

This problem may be caused by the turbulence of the network. We suggest users to upload a compressed *.vcf files with *.tar.gz or *.zip format.

How to avoid invalid analysis results?

This problem may be caused by incomplete or incorrect filling of parameters.

 

Does pedminer have a limit on the size of uploaded files?

The maximum file size allowed by pedmine is 50Mb. In order to reduce the upload time cost, please upload a compressed in *.zip or *.tar.gz format.

How long does it take to complete an analysis?

In general, pedminer will complete the analysis in 15 minutes, and the length of time is positively related to the sample size and number of variants. If the status bar is stuck for a unusually long time and does not update, please check whether the parameters are filled in correctly or contact us to check the problem.